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WormBase Tree Display for Gene: WBGene00008438

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Name Class

WBGene00008438SMapS_parentSequenceCHROMOSOME_II
IdentityVersion2
NameSequence_nameDH11.5
Molecular_name (12)
Other_nameCELE_DH11.5Accession_evidenceNDBBX284602
Public_nameDH11.5
DB_infoDatabaseAceViewgene2I285C
2I285
WormQTLgeneWBGene00008438
WormFluxgeneWBGene00008438
NDBlocus_tagCELE_DH11.5
PanthergeneCAEEL|WormBase=WBGene00008438|UniProtKB=G5EDP5
familyPTHR10024
NCBIgene3565199
RefSeqproteinNM_001267203.3
NM_182173.6
NM_182172.7
NM_001267202.3
TREEFAMTREEFAM_IDTF344264
TrEMBLUniProtAccQ8I4L8
G5EDP5
Q19016
G5EFC6
UniProt_GCRPUniProtAccG5EDP5
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
201 Aug 2011 13:24:35WBPerson1983EventAcquires_mergeWBGene00008437
Acquires_mergeWBGene00008437
StatusLive
Gene_infoBiotypeSO:0001217
Allele (230)
RNASeq_FPKM (74)
GO_annotation (16)
OrthologWBGene00141181Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00077969Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00145949Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00130010Caenorhabditis japonicaFrom_analysisInparanoid_7
WBGene00026165Caenorhabditis briggsaeFrom_analysisOrthoMCL
WormBase-Compara
WBGene00091526Pristionchus pacificusFrom_analysisInparanoid_7
WormBase-Compara
WBGene00147362Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g6294Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g9731Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17134Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20182Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g17303Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g7670Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g6175Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g974Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-DH11.5Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7527Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00023.g1372Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_20675Caenorhabditis latensFrom_analysisWormBase-Compara
Sp34_20149400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5135Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00128310Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable several functions, including calcium ion binding activity; phospholipid binding activity; and syntaxin binding activity. Predicted to be involved in cellular response to calcium ion; regulation of secretion by cell; and synaptic vesicle cycle. Predicted to be located in axon; plasma membrane; and secretory vesicle.Paper_evidenceWBPaper00065943
Curator_confirmed (2)
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDS (4)
Corresponding_CDS_historyDH11.5:wp90
DH11.5a:wp261
Corresponding_transcriptDH11.5b.1
DH11.5c.1
DH11.5d.1
DH11.5e.1
Other_sequence (28)
Associated_feature (27)
Experimental_infoRNAi_resultWBRNAi00030440Inferred_automaticallyRNAi_primary
WBRNAi00030441Inferred_automaticallyRNAi_primary
WBRNAi00043546Inferred_automaticallyRNAi_primary
WBRNAi00012622Inferred_automaticallyRNAi_primary
WBRNAi00043547Inferred_automaticallyRNAi_primary
WBRNAi00012621Inferred_automaticallyRNAi_primary
WBRNAi00092877Inferred_automaticallyRNAi_primary
Expr_patternExpr1014384
Expr1033667
Expr1147539
Expr2002109
Expr2020334
Drives_constructWBCnstr00032961
WBCnstr00032962
Construct_productWBCnstr00032961
WBCnstr00032962
Microarray_results (56)
Expression_cluster (207)
Interaction (34)
Map_infoPositivePositive_cloneDH11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII0.625084
ReferenceWBPaper00041549
MethodGene