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WormBase Tree Display for Gene: WBGene00008408

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Name Class

WBGene00008408SMapS_parentSequenceD2023
IdentityVersion1
NameSequence_nameD2023.4
Molecular_nameD2023.4
D2023.4.1
CE09074
Other_nameCELE_D2023.4Accession_evidenceNDBBX284605
Public_nameD2023.4
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (12)
RNASeq_FPKM (74)
GO_annotation00030524
00030525
00030526
00030527
00030528
00030529
00030530
00030531
00116309
Contained_in_operonCEOP5304
OrthologWBGene00052365Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00041644Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00041646Caenorhabditis briggsaeFrom_analysisOrthoMCL
WormBase-Compara
WBGene00140835Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00118844Pristionchus pacificusFrom_analysisOMA
WormBase-Compara
WBGene00217109Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00114077Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00192351Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g12985Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g13400Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10761Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11991Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g798Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g24927Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4367Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g14631Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g6721Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14442Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00755.g13911Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-D2023.4Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7783Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00021.g1279Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_10676Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_018115Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01319Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10800Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16812Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g4394Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50147300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g15862Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00093971Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095096Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00258391Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00263794Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00263796Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00263798Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00263800Strongyloides rattiFrom_analysisWormBase-Compara
SGD:S000000792Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
FB:FBgn0038302Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-040704-4Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-040718-292Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-041212-21Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-050913-41Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-041001-39Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-160728-17Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:10540Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
HGNC:23160Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
HGNC:27992Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoFinder
OrthoInspector
Panther
MGI:98233Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1916465Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:1921059Mus musculusFrom_analysisEnsEMBL-Compara
OrthoFinder
OrthoInspector
Panther
PhylomeDB
RGD:1565932Rattus norvegicusFrom_analysisEnsEMBL-Compara
OrthoFinder
OrthoInspector
Panther
PhylomeDB
RGD:1586174Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1307869Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionConcise_descriptionD2023.4 encodes a thialysine N-(epsilon)-acetyltransferase, belonging to the GCN5-related N-acetyltransferase superfamily; recombinant D2023.4 protein forms a catalytically active homodimer, most efficiently catalysing the N-acetylation of thialysine [S-(2-aminoethyl)-L-cysteine], O-(2-aminoethyl)-L-serine andS-(2-aminoethyl)-D,L-homocysteine.Paper_evidenceWBPaper00024871
Curator_confirmedWBPerson567
Date_last_updated18 Jul 2005 00:00:00
Automated_descriptionEnables N-acetyltransferase activity. Is an ortholog of human SAT1 (spermidine/spermine N1-acetyltransferase 1) and SAT2 (spermidine/spermine N1-acetyltransferase family member 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSD2023.4
Corresponding_transcriptD2023.4.1
Other_sequenceCRC09768_1
Tcol_isotig20690
CJC15025_1
CSC01534_1
Tcir_isotig11374
FD517540.1
Associated_featureWBsf669421
WBsf234586
Experimental_infoRNAi_result (2)
Expr_patternExpr1011603
Expr1033644
Expr1147448
Expr2002071
Expr2020296
Drives_constructWBCnstr00032988
Construct_productWBCnstr00032988
Microarray_results (19)
Expression_cluster (128)
Interaction (47)
Map_infoPositivePositive_cloneD2023Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV3.39005
ReferenceWBPaper00024871
WBPaper00038491
WBPaper00055090
MethodGene