WormBase Tree Display for Gene: WBGene00007408

WBGene00007408 SMap: S_parent: Sequence: C07B5
  Identity: Version: 1
    Name: Sequence_name: C07B5.3
      Molecular_name: C07B5.3
        C07B5.3.1
        CE00893
      Other_name: CELE_C07B5.3 Accession_evidence: NDB BX284606
      Public_name: C07B5.3
    DB_info: Database: AceView gene XK140
        WormQTL gene WBGene00007408
        WormFlux gene WBGene00007408
        NDB locus_tag CELE_C07B5.3
        NCBI gene 182360
        RefSeq protein NM_077201.3
        TREEFAM TREEFAM_ID TF319496
        TrEMBL UniProtAcc Q17776
        UniProt_GCRP UniProtAcc Q17776
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (19)
    RNASeq_FPKM (74)
    Ortholog: WBGene00059756 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00036159 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00152587 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00143799 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00162185 Caenorhabditis brenneri From_analysis: OMA
            WormBase-Compara
      WBGene00133830 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00160934 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00151832 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00155846 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CSP21.g8789 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g131 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g20731 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6221 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g15343 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g7097 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g26471 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g8580 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4757 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00044.g2388 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C07B5.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13460 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_02230 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_023310 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05166 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g16562 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0055910 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19756 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00016825 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00008914 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in ABalapppaa; neurons; and in male based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; eat-2; and elt-2 based on microarray and RNA-seq studies. Is affected by six chemicals including nicotinic acid; Mercuric Chloride; and cholesterol based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C07B5.3
    Corresponding_transcript: C07B5.3.1
    Associated_feature: WBsf1006461
      WBsf237776
  Experimental_info: RNAi_result: WBRNAi00112670 Inferred_automatically: RNAi_primary
      WBRNAi00010373 Inferred_automatically: RNAi_primary
      WBRNAi00028622 Inferred_automatically: RNAi_primary
      WBRNAi00061358 Inferred_automatically: RNAi_primary
      WBRNAi00039984 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr84
      Expr1025806
      Expr1144062
      Expr2000563
      Expr2018789
    Drives_construct: WBCnstr00017983
      WBCnstr00033762
    Construct_product: WBCnstr00033762
    Microarray_results (18)
    Expression_cluster (116)
    Interaction (15)
  Map_info: Positive: Positive_clone: C07B5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 1.37924
  Reference: WBPaper00024370
  Method: Gene