WormBase Tree Display for Gene: WBGene00007355

WBGene00007355 SMap: S_parent: Sequence: C06A1
  Identity: Version: 2
    Name: CGC_name: rpb-6 Person_evidence: WBPerson1787
      Sequence_name: C06A1.5
      Molecular_name: C06A1.5
        C06A1.5.1
        CE02117
      Other_name: CELE_C06A1.5 Accession_evidence: NDB BX284602
      Public_name: rpb-6
    DB_info: Database: AceView gene 2K871
        WormQTL gene WBGene00007355
        WormFlux gene WBGene00007355
        NDB locus_tag CELE_C06A1.5
        Panther gene CAEEL|WormBase=WBGene00007355|UniProtKB=Q17684
          family PTHR10773
        NCBI gene 174630
        RefSeq protein NM_063877.5
        SwissProt UniProtAcc Q17684
        TREEFAM TREEFAM_ID TF103041
        UniProt_GCRP UniProtAcc Q17684
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 04 Oct 2007 14:17:58 WBPerson2970 Name_change: CGC_name: rpb-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpb
    Allele: WBVar01499702
      WBVar01498435
      WBVar00376445
      WBVar00376446
      WBVar00763526
      WBVar00763527
      WBVar00763528
      WBVar01498940
      WBVar01499862
    RNASeq_FPKM (74)
    GO_annotation (21)
    Contained_in_operon: CEOP2496
    Ortholog: WBGene00053409 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00026003 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00152993 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00138022 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00234319 Brugia malayi From_analysis: WormBase-Compara
      CSP21.g14962 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g19166 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12269 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g9177 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22184 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16813 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14535 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g10072 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17347 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-rpb-6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8948 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00248.g7912 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_005502 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03836 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5159 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g6413 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20291800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5765 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237606 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00306060 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259338 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291746 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000006391 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0003275 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040718-279 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:9193 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1349393 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:708567 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable DNA binding activity and DNA-directed 5'-3' RNA polymerase activity. Predicted to contribute to RNA polymerase I activity; RNA polymerase II activity; and RNA polymerase III activity. Involved in developmental process and reproduction. Predicted to be located in nucleus. Predicted to be part of RNA polymerase I complex; RNA polymerase II, core complex; and RNA polymerase III complex. Is an ortholog of human POLR2F (RNA polymerase II, I and III subunit F). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C06A1.5
    Corresponding_transcript: C06A1.5.1
    Other_sequence (76)
    Associated_feature: WBsf981272
      WBsf989401
      WBsf989402
      WBsf989403
      WBsf989404
      WBsf1013051
      WBsf1013052
      WBsf222029
  Experimental_info: RNAi_result (17)
    Expr_pattern: Expr1011827
      Expr1033169
      Expr1143890
      Expr2015426
      Expr2033661
    Drives_construct: WBCnstr00033805
    Construct_product: WBCnstr00033805
    Microarray_results (19)
    Expression_cluster (111)
    Interaction (238)
  Map_info (3)
  Reference: WBPaper00029038
    WBPaper00038491
    WBPaper00055090
    WBPaper00061786
    WBPaper00064641
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene