WormBase Tree Display for Gene: WBGene00007168

WBGene00007168 SMap: S_parent: Sequence: B0393
  Identity: Version: 2
    Name: CGC_name: fbxl-2 Person_evidence: WBPerson26504
      Sequence_name: B0393.3
      Molecular_name: B0393.3
        B0393.3.1
        CE54603
      Other_name: CELE_B0393.3 Accession_evidence: NDB BX284603
      Public_name: fbxl-2
    DB_info: Database: AceView gene 3F849
        WormQTL gene WBGene00007168
        WormFlux gene WBGene00007168
        NDB locus_tag CELE_B0393.3
        Panther gene CAEEL|WormBase=WBGene00007168|UniProtKB=Q17492
          family PTHR13318
        NCBI gene 175630
        RefSeq protein NM_065579.7
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Jan 2024 23:28:21 WBPerson51134 Name_change: CGC_name: fbxl-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxl
    Allele (19)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP3866
    Ortholog: WBGene00061710 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00037490 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00138998 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      CBOVI.g5972 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5988 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1593 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g20409 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23336 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20282 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12889 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g18594 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22326 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g2860 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1240 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00712.g13615 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-B0393.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold478.g1801 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00221.g7368 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_22468 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010033 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11595 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_30064500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7534 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00259594 Strongyloides ratti From_analysis: WormBase-Compara
      FB:FBgn0051633 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
      FB:FBgn0032047 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
      ZFIN:ZDB-GENE-140106-120 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      HGNC:21658 Homo sapiens From_analysis: EnsEMBL-Compara
            Panther
      MGI:2443416 Mus musculus From_analysis: EnsEMBL-Compara
            Panther
    Paralog (22)
    Structured_description: Automated_description: Enriched in several structures, including GLR; ciliated neurons; germ line; male distal tip cell; and pharyngeal gland cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and daf-12 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by eleven chemicals including manganese chloride; Zidovudine; and allantoin based on RNA-seq; proteomic; and microarray studies. Is predicted to encode a protein with the following domains: Leucine Rich repeat and Leucine-rich repeat domain superfamily. Is an ortholog of human FBXL13 (F-box and leucine rich repeat protein 13). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0393.3
    Corresponding_CDS_history: B0393.3:wp290
    Corresponding_transcript: B0393.3.1
    Other_sequence (11)
    Associated_feature: WBsf645122
      WBsf976111
      WBsf976112
      WBsf992207
      WBsf1014802
      WBsf224794
      WBsf224795
      WBsf224796
  Experimental_info: RNAi_result: WBRNAi00009742 Inferred_automatically: RNAi_primary
      WBRNAi00028120 Inferred_automatically: RNAi_primary
      WBRNAi00007601 Inferred_automatically: RNAi_primary
      WBRNAi00039008 Inferred_automatically: RNAi_primary
      WBRNAi00005065 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012748
      Expr1033084
      Expr1143173
      Expr2000167
      Expr2018385
    Drives_construct: WBCnstr00033952
    Construct_product: WBCnstr00033952
    Microarray_results (20)
    Expression_cluster (182)
    Interaction (192)
  Map_info: Map: III Position: -2.57569
    Positive: Positive_clone: B0393 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene