WormBase Tree Display for Gene: WBGene00007015

WBGene00007015 Evidence: Author_evidence: Bourbon H-M
  SMap: S_parent: Sequence: R144
  Identity: Version: 1
    Name: CGC_name: mdt-11
      Sequence_name: R144.9
      Molecular_name: R144.9
        R144.9.1
        CE25092
      Other_name: CELE_R144.9 Accession_evidence: NDB BX284603
      Public_name: mdt-11
    DB_info: Database: AceView gene 3G111
        WormQTL gene WBGene00007015
        WormFlux gene WBGene00007015
        NDB locus_tag CELE_R144.9
        Panther gene CAEEL|WormBase=WBGene00007015|UniProtKB=Q9BI74
          family PTHR22890
        NCBI gene 175682
        RefSeq protein NM_065665.6
        SwissProt UniProtAcc Q9BI74
        TREEFAM TREEFAM_ID TF318328
        UniProt_GCRP UniProtAcc Q9BI74
    Species: Caenorhabditis elegans
    History: Version_change: 1 14 May 2004 11:48:16 WBPerson1845 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mdt
    Allele: WBVar02156582
      WBVar01628490
      WBVar00397113
      WBVar01644444
      WBVar00825240
      WBVar01500247
      WBVar01500248
    Strain: WBStrain00051354
    RNASeq_FPKM (74)
    GO_annotation: 00091420
      00091421
      00091422
      00091423
      00115208
      00115209
      00115210
    Contained_in_operon: CEOP3256
    Ortholog: WBGene00054640 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00036437 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00155133 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00211685 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00138053 Caenorhabditis japonica From_analysis: Inparanoid_8
      CSP26.g18639 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g20668 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP32.g12423 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g7279 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3028 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_III.g10222 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_III.g10228 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14394 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00009.g634 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_009910 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_30182700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7617 Caenorhabditis elegans From_analysis: WormBase-Compara
      FB:FBgn0036811 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-091207-2 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      HGNC:32687 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:1913422 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
      RGD:1563202 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
            PhylomeDB
    Structured_description: Automated_description: Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex. Is an ortholog of human MED11 (mediator complex subunit 11). Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R144.9
    Corresponding_transcript: R144.9.1
    Other_sequence: CRC01555_1
      EX010184.1
      CR07212
      CR03114
      EX010758.1
      CR07281
      HBC13895
      Hbac_isotig04351
    Associated_feature: WBsf224838
  Experimental_info: RNAi_result (38)
    Expr_pattern: Expr1027005
      Expr1033005
      Expr1155608
      Expr2013470
      Expr2031704
    Drives_construct: WBCnstr00034036
    Construct_product: WBCnstr00034036
    Microarray_results (18)
    Expression_cluster (97)
    Interaction (32)
  Map_info: Map: III Position: -2.22014 Error: 0.003643
    Positive: Positive_clone: R144 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00006530
    WBPaper00027707
    WBPaper00029038
    WBPaper00031331
    WBPaper00038491
    WBPaper00041771
    WBPaper00055090
    WBPaper00059726
    WBPaper00065308
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene