WormBase Tree Display for Gene: WBGene00007012

WBGene00007012 Evidence: Author_evidence: Bourbon H-M
  SMap: S_parent: Sequence: ZK546
  Identity: Version: 1
    Name: CGC_name: mdt-4
      Sequence_name: ZK546.13
      Molecular_name: ZK546.13
        ZK546.13.1
        CE34460
      Other_name: CELE_ZK546.13 Accession_evidence: NDB BX284602
      Public_name: mdt-4
    DB_info: Database: AceView gene 2F232
        WormQTL gene WBGene00007012
        WormFlux gene WBGene00007012
        NDB locus_tag CELE_ZK546.13
        Panther gene CAEEL|WormBase=WBGene00007012|UniProtKB=Q23523
          family PTHR13208
        NCBI gene 173852
        RefSeq protein NM_062504.5
        SwissProt UniProtAcc Q23523
        TREEFAM TREEFAM_ID TF332476
        UniProt_GCRP UniProtAcc Q23523
    Species: Caenorhabditis elegans
    History: Version_change: 1 14 May 2004 11:48:16 WBPerson1845 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mdt
    Allele (32)
    RNASeq_FPKM (74)
    GO_annotation: 00078727
      00078728
      00078729
      00078730
      00078731
      00115199
      00115200
      00115201
    Contained_in_operon: CEOP2144
    Ortholog: WBGene00025360 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00057460 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00147032 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00124477 Caenorhabditis japonica From_analysis: OMA
      WBGene00157887 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00163029 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00214029 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00134170 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00080201 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00112201 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00150827 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00227754 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g6716 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g8783 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8566 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g19397 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g14983 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g7418 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21429 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g5127 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00105.g4471 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-mdt-4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g11212 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00182.g6479 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_05968 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005923 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10101 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_20087600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4373 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239373 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00285082 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0035754 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050417-438 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:17903 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1914631 Mus musculus From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1306671 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00022766
    Structured_description: Automated_description: Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of core mediator complex. Human ortholog(s) of this gene implicated in cervical cancer. Is an ortholog of human MED4 (mediator complex subunit 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:4362 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:17903)
  Molecular_info: Corresponding_CDS: ZK546.13
    Corresponding_CDS_history: ZK546.13:wp102
    Corresponding_transcript: ZK546.13.1
    Other_sequence (11)
    Associated_feature: WBsf665497
      WBsf987747
      WBsf222978
  Experimental_info: RNAi_result: WBRNAi00108641 Inferred_automatically: RNAi_primary
      WBRNAi00059503 Inferred_automatically: RNAi_primary
      WBRNAi00009475 Inferred_automatically: RNAi_primary
      WBRNAi00117660 Inferred_automatically: RNAi_primary
      WBRNAi00117662 Inferred_automatically: RNAi_primary
      WBRNAi00117661 Inferred_automatically: RNAi_primary
      WBRNAi00108566 Inferred_automatically: RNAi_primary
      WBRNAi00085236 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018473
      Expr1033002
      Expr1162917
      Expr2013484
      Expr2031718
    Drives_construct: WBCnstr00034038
    Construct_product: WBCnstr00034038
    Microarray_results (11)
    Expression_cluster (63)
    Interaction (64)
  Map_info: Map: II Position: -2.8
    Positive: Positive_clone: ZK546 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00006530
    WBPaper00027707
    WBPaper00029038
    WBPaper00038491
    WBPaper00055090
    WBPaper00064789
    WBPaper00065308
  Remark (3)
  Method: Gene