WormBase Tree Display for Gene: WBGene00006659
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WBGene00006659 | Evidence | Person_evidence | WBPerson655 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_II | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | twk-4 | Person_evidence | WBPerson655 | |||||
Sequence_name | ZK1067.5 | ||||||||
Molecular_name | ZK1067.5 | ||||||||
ZK1067.5.1 | |||||||||
CE52341 | |||||||||
Other_name (2) | |||||||||
Public_name | twk-4 | ||||||||
DB_info | Database | AceView | gene | 2J480 | |||||
WormQTL | gene | WBGene00006659 | |||||||
WormFlux | gene | WBGene00006659 | |||||||
NDB | locus_tag | CELE_ZK1067.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006659|UniProtKB=Q23386 | |||||||
family | PTHR11003 | ||||||||
NCBI | gene | 192079 | |||||||
RefSeq | protein | NM_001356885.3 | |||||||
TrEMBL | UniProtAcc | Q23386 | |||||||
UniProt_GCRP | UniProtAcc | Q23386 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | twk | ||||||||
Allele (238) | |||||||||
Strain | WBStrain00051082 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog | WBGene00024224 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||||
OrthoMCL | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00147150 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
WBGene00185010 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00064316 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
CBOVI.g6833 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
CSP28.g14379 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
CSP29.g21983 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
CSP32.g4174 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
CSP38.g2976 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
CSP39.g13160 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
Cang_2012_03_13_00056.g2884 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
Cnig_chr_II.g4150 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_04495.g33075 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
OTIPU.nOt.2.0.1.g05561 | Oscheius tipulae | From_analysis | WormBase-Compara | ||||||
Pan_g18298 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
Sp34_20298010 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
nigoni.pc_2016.07.11_119.g29172 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
WBGene00117305 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00290219 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
WBGene00301845 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
Paralog (47) | |||||||||
Structured_description | Automated_description | Predicted to enable outward rectifier potassium channel activity and potassium ion leak channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to be located in membrane. Expressed in sensory neurons. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZK1067.5 | |||||||
Corresponding_CDS_history | ZK1067.5:wp193 | ||||||||
ZK1067.5:wp245 | |||||||||
ZK1067.5:wp261 | |||||||||
Corresponding_transcript | ZK1067.5.1 | ||||||||
Other_sequence (24) | |||||||||
Associated_feature (7) | |||||||||
Experimental_info | RNAi_result | WBRNAi00062554 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095006 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062552 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022509 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00038138 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062553 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00059094 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00059093 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1366 | ||||||||
Expr1024954 | |||||||||
Expr1162523 | |||||||||
Expr2017676 | |||||||||
Drives_construct | WBCnstr00010239 | ||||||||
Construct_product | WBCnstr00010239 | ||||||||
Microarray_results (33) | |||||||||
Expression_cluster (85) | |||||||||
Interaction (66) | |||||||||
Map_info | Map | II | Position | 1.09342 | Error | 0.000317 | |||
Positive | Positive_clone | ZK1067 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
ZK1097 | Inferred_automatically | From CDS info | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00026748 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | twk-4 was connected to C40C9.1 | Person_evidence | WBPerson655 | ||||||
twk-4 was once linked to ZK1097.5 which was a typo | Curator_confirmed | WBPerson1845 | |||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |