WormBase Tree Display for Gene: WBGene00005159

WBGene00005159 SMap: S_parent: Sequence: C18F10
  Identity: Version: 1
    Name: CGC_name: srg-1 Person_evidence: WBPerson42
      Sequence_name: C18F10.4
      Molecular_name: C18F10.4
        C18F10.4.1
        CE33270
      Other_name: CELE_C18F10.4 Accession_evidence: NDB BX284603
      Public_name: srg-1
    DB_info: Database: AceView gene 3H344
        WormQTL gene WBGene00005159
        WormFlux gene WBGene00005159
        NDB locus_tag CELE_C18F10.4
        Panther gene CAEEL|WormBase=WBGene00005159|UniProtKB=P46570
          family PTHR31627
        NCBI gene 191828
        RefSeq protein NM_065965.3
        SwissProt UniProtAcc P46570
        TREEFAM TREEFAM_ID TF315299
        UniProt_GCRP UniProtAcc P46570
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:37 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srg
    Allele (22)
    Legacy_information: [C.elegansII] NMK. Encodes predicted serpentine receptor. In possible operon, srg-1 to srg-9. [Troemel et al. 1995; CX]
    Strain: WBStrain00047642
    RNASeq_FPKM (74)
    GO_annotation: 00046484
      00046485
      00113574
      00113575
      00113576
    Ortholog: WBGene00078076 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00081196 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00099759 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00099737 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00091540 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00089984 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00271712 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP21.g10346 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g15998 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g16000 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g16001 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g3076 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP28.g19662 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g14920 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP39.g26505 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11283 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-srg-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_02028.g24460 Caenorhabditis sinica From_analysis: WormBase-Compara
      Sp34_30280110 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7895 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00105832 Pristionchus pacificus From_analysis: WormBase-Compara
    Paralog (32)
    Structured_description: Automated_description: Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C18F10.4
    Corresponding_CDS_history: C18F10.4:wp93
      C18F10.4:wp212
    Corresponding_transcript: C18F10.4.1
    Associated_feature: WBsf226793
  Experimental_info: RNAi_result (4)
    Expr_pattern: Expr1021749
      Expr1145003
      Expr2016319
      Expr2034546
    Drives_construct: WBCnstr00035158
    Construct_product: WBCnstr00035158
    Microarray_results (14)
    Expression_cluster (26)
    Interaction (42)
  Map_info: Map: III Position: -1.40745 Error: 6.2e-05
    Positive: Positive_clone: C18F10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00001521
    WBPaper00002314
    WBPaper00004238
    WBPaper00015440
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene