WormBase Tree Display for Gene: WBGene00004798

WBGene00004798 SMap: S_parent: Sequence: F43D9
  Identity: Version: 1
    Name: CGC_name: sip-1 Person_evidence: WBPerson1414
      Sequence_name: F43D9.4
      Molecular_name: F43D9.4
        F43D9.4.1
        CE00994
      Other_name: SIP/1
        sec-1
        CELE_F43D9.4 Accession_evidence: NDB BX284603
      Public_name: sip-1
    DB_info: Database: AceView gene 3L596
        WormQTL gene WBGene00004798
        WormFlux gene WBGene00004798
        NDB locus_tag CELE_F43D9.4
        Panther gene CAEEL|WormBase=WBGene00004798|UniProtKB=Q20363
          family PTHR45640
        NCBI gene 176471
        RefSeq protein NM_066915.5
        SwissProt UniProtAcc Q20363
        UniProt_GCRP UniProtAcc Q20363
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sip
    Allele (18)
    Legacy_information: [C.elegansII] NMK. Expression in gonad and early embryo increased after treatment with > 0.2 mM cadmium. Encodes novel protein related to heat shock proteins. [CR]
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog: WBGene00055774 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00037808 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00154447 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00132816 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00221205 Brugia malayi From_analysis: WormBase-Compara
      WBGene00223471 Brugia malayi From_analysis: WormBase-Compara
      WBGene00224522 Brugia malayi From_analysis: WormBase-Compara
      WBGene00229572 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g9011 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g9022 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7325 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4855 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP29.g15296 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP39.g18289 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g20635 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g438 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00619.g12859 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-sip-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold628.g7337 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00128.g5098 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11420 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_11934 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010451 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04197 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04945 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10534 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10802 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_10227200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_10227300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8883 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239199 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00248894 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00249633 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00092042 Pristionchus pacificus From_analysis: WormBase-Compara
      FB:FBgn0001224 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            Panther
      FB:FBgn0001223 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            Panther
    Paralog (17)
    Structured_description (2)
  Molecular_info: Corresponding_CDS: F43D9.4
    Corresponding_transcript: F43D9.4.1
    Other_sequence (50)
    Associated_feature: WBsf651460
      WBsf667395
      WBsf667396
      WBsf976005
      WBsf976006
      WBsf976007
      WBsf976008
      WBsf976009
      WBsf227467
      WBsf227468
  Experimental_info: RNAi_result (19)
    Expr_pattern: Expr1607
      Expr1608
      Expr12380
      Expr14422
      Expr15512
      Expr1025283
      Expr1032381
      Expr1151051
      Expr2015821
      Expr2034054
    Drives_construct: WBCnstr00035382
      WBCnstr00040852
      WBCnstr00042203
    Construct_product: WBCnstr00035382
      WBCnstr00042203
    Antibody: WBAntibody00001798
    Microarray_results (21)
    Expression_cluster (325)
    Interaction (1036)
    WBProcess: WBbiopr:00000053
  Map_info: Map: III Position: 2.93581 Error: 0.122939
    Positive: Positive_clone: CR#7A-2
        F43D9 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5626
    Pseudo_map_position
  Reference (32)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene