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WormBase Tree Display for Gene: WBGene00004318

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Name Class

WBGene00004318EvidencePerson_evidenceWBPerson451
SMapS_parentSequenceT22C1
IdentityVersion1
NameCGC_namerbg-2Person_evidenceWBPerson451
Sequence_nameT22C1.10
Molecular_nameT22C1.10a
T22C1.10a.1
CE06498
T22C1.10b
CE36203
T22C1.10b.1
Other_nameCELE_T22C1.10Accession_evidenceNDBBX284601
Public_namerbg-2
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:34WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrbg
Allele (137)
StrainWBStrain00037356
RNASeq_FPKM (74)
GO_annotation00075993
00075994
00075995
00075996
00075997
00075998
00112665
OrthologWBGene00070443Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00030071Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00144903Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00143795Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00121955Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WBGene00226181Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g9388Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7787Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g7792Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20664Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g6052Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7918Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g7920Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g4849Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g4851Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g24526Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g24528Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8277Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g8279Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5825Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15269Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g6151Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8903Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14204Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g14206Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00043.g2323Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-rbg-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g1544Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold80.g503Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold80.g504Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00462.g11691Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00462.g11693Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13172Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_13174Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_000422Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_000424Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05837Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g23034Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10072610Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g1491Caenorhabditis elegansFrom_analysisWormBase-Compara
chrI_pilon.g1493Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00119734Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00070441Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00238508Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00260429Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289012Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0027505Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
ZFIN:ZDB-GENE-030616-610Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:17168Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:1916043Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1311518Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
Structured_descriptionAutomated_descriptionPredicted to enable enzyme regulator activity. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in Martsolf syndrome and Warburg micro syndrome 2. Is an ortholog of human RAB3GAP2 (RAB3 GTPase activating non-catalytic protein subunit 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0111586Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17168)
DOID:0110717Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17168)
Molecular_infoCorresponding_CDST22C1.10a
T22C1.10b
Corresponding_transcriptT22C1.10a.1
T22C1.10b.1
Other_sequence (14)
Associated_featureWBsf643503
WBsf656588
WBsf656589
WBsf656590
WBsf656591
WBsf656592
WBsf218098
WBsf218099
Experimental_infoRNAi_resultWBRNAi00004259Inferred_automaticallyRNAi_primary
WBRNAi00053802Inferred_automaticallyRNAi_primary
WBRNAi00035793Inferred_automaticallyRNAi_primary
WBRNAi00116429Inferred_automaticallyRNAi_primary
WBRNAi00001757Inferred_automaticallyRNAi_primary
Expr_patternExpr1021619
Expr1032143
Expr1157350
Expr2015269
Expr2033503
Drives_constructWBCnstr00035567
Construct_productWBCnstr00035567
Microarray_results (23)
Expression_cluster (96)
Interaction (15)
Map_info (3)
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00064339
WBPaper00064789
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene