WormBase Tree Display for Gene: WBGene00004192

WBGene00004192 SMap: S_parent: Sequence: ZK809
  Identity: Version: 1
    Name: CGC_name: prx-2
      Sequence_name: ZK809.7
      Molecular_name: ZK809.7
        ZK809.7.1
        CE40543
      Other_name: CELE_ZK809.7 Accession_evidence: NDB BX284604
      Public_name: prx-2
    DB_info: Database: AceView gene 4M411
        WormQTL gene WBGene00004192
        WormFlux gene WBGene00004192
        NDB locus_tag CELE_ZK809.7
        NCBI gene 178094
        RefSeq protein NM_069800.5
        TREEFAM TREEFAM_ID TF105312
        TrEMBL UniProtAcc Q23601
        UniProt_GCRP UniProtAcc Q23601
        OMIM gene 170993
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: prx
    Allele (19)
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog: WBGene00062604 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00073570 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00028435 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00145935 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00194229 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g8242 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g20556 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g573 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g658 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7770 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9904 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13702 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20908 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g9737 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g763 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00011.g844 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-prx-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00092.g4017 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_21331 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014133 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08957 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5726 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40324600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11901 Caenorhabditis elegans From_analysis: WormBase-Compara
      FB:FBgn0035876 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-070530-2 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      HGNC:9717 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            PhylomeDB
      MGI:107486 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:61814 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
    Structured_description (2)
  Disease_info: Potential_model: DOID:0080480 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9717)
      DOID:0080377 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9717)
  Molecular_info: Corresponding_CDS: ZK809.7
    Corresponding_CDS_history: ZK809.7:wp166
    Corresponding_transcript: ZK809.7.1
    Associated_feature: WBsf646399
      WBsf660747
      WBsf997895
      WBsf997896
      WBsf1018238
  Experimental_info: RNAi_result (19)
    Expr_pattern: Expr1016339
      Expr1032052
      Expr1163151
      Expr2015125
      Expr2033363
    Drives_construct: WBCnstr00035646
    Construct_product: WBCnstr00035646
    Microarray_results (16)
    Expression_cluster (90)
    Interaction (42)
  Map_info: Map: IV Position: 5.10274 Error: 0.002069
    Positive: Positive_clone: ZK809 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00005877
    WBPaper00006517
    WBPaper00026667
    WBPaper00027315
    WBPaper00031003
    WBPaper00038491
    WBPaper00055090
    WBPaper00056693
    WBPaper00059323
  Remark: Note that some Authors have incorrectly published prx genes as pex genes. pex genes are a separate class of gene not related to prx genes [JAH][030108 ck1]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene