Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00003690

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00003690SMapS_parentSequenceC28D4
IdentityVersion1
NameCGC_namenhr-100Person_evidenceWBPerson600
Sequence_nameC28D4.1
Molecular_nameC28D4.1
C28D4.1.1
CE28893
C28D4.1.2
Other_nameCELE_C28D4.1Accession_evidenceNDBBX284604
Public_namenhr-100
DB_infoDatabaseAceViewgene4K497
WormQTLgeneWBGene00003690
WormFluxgeneWBGene00003690
NDBlocus_tagCELE_C28D4.1
PanthergeneCAEEL|WormBase=WBGene00003690|UniProtKB=O17611
familyPTHR24083
NCBIgene177806
RefSeqproteinNM_069330.7
SwissProtUniProtAccO17611
TREEFAMTREEFAM_IDTF315528
UniProt_GCRPUniProtAccO17611
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:32WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (36)
RNASeq_FPKM (74)
GO_annotation (14)
Contained_in_operonCEOP4336
OrthologWBGene00070325Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00035358Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00138813Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00160683Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00130336Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00222339Brugia malayiFrom_analysisWormBase-Compara
WBGene00224250Brugia malayiFrom_analysisWormBase-Compara
WBGene00224690Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7906Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g738Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g22093Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11863Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3934Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g15710Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2397Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5817Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g10262Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g18978Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g23403Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25623Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g15395Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00526.g11868Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_11226.g23116Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g12911Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12361Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_03038.g28861Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_05424.g34967Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_07415.g37745Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_21668Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013245Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g19451Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23149Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40250420Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g11391Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00215377Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00237444Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239244Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241769Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244924Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00267740Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288423Trichuris murisFrom_analysisWormBase-Compara
WBGene00292803Trichuris murisFrom_analysisWormBase-Compara
WBGene00301850Trichuris murisFrom_analysisWormBase-Compara
WBGene00301886Trichuris murisFrom_analysisWormBase-Compara
Paralog (43)
Structured_description (2)
Molecular_infoCorresponding_CDSC28D4.1
Corresponding_CDS_historyC28D4.1:wp20
C28D4.1:wp60
Corresponding_transcriptC28D4.1.1
C28D4.1.2
Associated_featureWBsf978367
WBsf997467
WBsf228865
WBsf228866
WBsf228867
Transcription_factorWBTranscriptionFactor000545
Experimental_infoRNAi_resultWBRNAi00041407Inferred_automaticallyRNAi_primary
WBRNAi00011297Inferred_automaticallyRNAi_primary
WBRNAi00076172Inferred_automaticallyRNAi_primary
Expr_patternExpr1025435
Expr1031717
Expr1145437
Expr1200125
Expr1200353
Expr1200354
Expr2013997
Expr2032237
Drives_constructWBCnstr00035943
Construct_productWBCnstr00016771
WBCnstr00035943
Microarray_results (21)
Expression_cluster (102)
InteractionWBInteraction000149438
WBInteraction000247173
WBInteraction000279616
WBInteraction000315069
WBInteraction000360842
WBInteraction000526754
Map_infoMapIVPosition4.38949Error0.001289
PositivePositive_cloneC28D4Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point5022
Pseudo_map_position
ReferenceWBPaper00027309
Remarkyk734h8, yk737c5, yk718h11, yk786a06 - 2nd half of predicted orf; orf has two NRs fused - operon? [Sluder A][030102 ck1]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene