WormBase Tree Display for Gene: WBGene00003148

WBGene00003148 Evidence: Person_evidence: WBPerson29
  SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 1
    Name: CGC_name: mbf-1 Person_evidence: WBPerson29
      Sequence_name: H21P03.1
      Molecular_name: H21P03.1
        H21P03.1.1
        CE18819
      Other_name: CELE_H21P03.1 Accession_evidence: NDB BX284604
      Public_name: mbf-1
    DB_info: Database: AceView gene 4M244
        WormQTL gene WBGene00003148
        WormFlux gene WBGene00003148
        NDB locus_tag CELE_H21P03.1
        Panther gene CAEEL|WormBase=WBGene00003148|UniProtKB=Q9XTV4
          family PTHR10245
        NCBI gene 178071
        RefSeq protein NM_069765.8
        TREEFAM TREEFAM_ID TF300064
        TrEMBL UniProtAcc Q9XTV4
        UniProt_GCRP UniProtAcc Q9XTV4
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:30 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mbf
    Allele (22)
    Strain: WBStrain00036428
    RNASeq_FPKM (74)
    GO_annotation: 00101230
      00101231
      00101232
      00110614
    Contained_in_operon: CEOP4444
    Ortholog: WBGene00062638 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00028465 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00149654 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00164147 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00098456 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00127565 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00224928 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g8178 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4908 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21897 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g541 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g593 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g26761 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14796 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g28165 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g729 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_16003.g25228 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-mbf-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold507.g2456 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00384.g10499 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_014166 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10293 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g7787 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40328310 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11863 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241924 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00263930 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00293793 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000007253 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0262732 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1710 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3164 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1891227 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1308073 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Predicted to be located in nucleus. Expressed in tail. Is an ortholog of human EDF1 (endothelial differentiation related factor 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H21P03.1
    Corresponding_transcript: H21P03.1.1
    Other_sequence (78)
    Associated_feature: WBsf652216
      WBsf668331
      WBsf981823
      WBsf230884
    Gene_product_binds (70)
    Transcription_factor: WBTranscriptionFactor001030
  Experimental_info: RNAi_result (3)
    Expr_pattern: Expr6279
      Expr1022740
      Expr1031484
      Expr1153178
      Expr1200138
      Expr2013430
      Expr2031664
    Drives_construct: WBCnstr00002492
      WBCnstr00036217
    Construct_product: WBCnstr00016780
      WBCnstr00016814
      WBCnstr00016815
      WBCnstr00036217
    Microarray_results (19)
    Expression_cluster (148)
    Interaction (43)
  Map_info: Map: IV Position: 4.98838 Error: 0.000462
    Positive: Positive_clone: H21P03 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00061738
  Remark: The naming of the locus mbf-1 is based on its high similarity with mbf1 gene in human, Drosophila, yeast, plant Person_evidence: WBPerson29
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene