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WormBase Tree Display for Gene: WBGene00001944

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Name Class

WBGene00001944SMapS_parentSequenceE03A3
IdentityVersion1
NameCGC_namehis-70Person_evidenceWBPerson160
Sequence_nameE03A3.4
Molecular_nameE03A3.4
E03A3.4.1
CE44880
Other_nameCELE_E03A3.4Accession_evidenceNDBBX284603
Public_namehis-70
DB_infoDatabaseAceViewgene3F150
WormQTLgeneWBGene00001944
WormFluxgeneWBGene00001944
NDBlocus_tagCELE_E03A3.4
PanthergeneCAEEL|WormBase=WBGene00001944|UniProtKB=Q27490
familyPTHR11426
NCBIgene184006
RefSeqproteinNM_065411.4
SwissProtUniProtAccQ27490
UniProt_GCRPUniProtAccQ27490
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:26WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhis
AlleleWBVar02151518
WBVar00395309
WBVar00395310
WBVar01499654
WBVar00395311
WBVar00093998
WBVar00094022
Possibly_affected_byWBVar02153221
StrainWBStrain00032848
WBStrain00037187
WBStrain00007465
WBStrain00007464
WBStrain00007461
RNASeq_FPKM (74)
GO_annotation (14)
OrthologWBGene00184983Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00184984Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00184988Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00191384Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00190858Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00190366Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00149744Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00164711Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00146941Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00160694Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00131214Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00051224Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00068747Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00068625Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00078837Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00078828Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00069802Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00066524Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00069404Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00069403Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00064526Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00155607Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160655Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00223686Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g5125Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5452Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g9191Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14775Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g21542Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g6741Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g864Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g11889Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g17893Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g17950Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g23468Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g23470Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g9883Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8308Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP40.g14261Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g17884Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_I.g108Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14743Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01864.g23578Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01864.g23580Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_022517Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIII_pilon.g7365Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00244700Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00110455Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00286174Trichuris murisFrom_analysisWormBase-Compara
WBGene00286307Trichuris murisFrom_analysisWormBase-Compara
WBGene00298431Trichuris murisFrom_analysisWormBase-Compara
WBGene00299712Trichuris murisFrom_analysisWormBase-Compara
WBGene00299713Trichuris murisFrom_analysisWormBase-Compara
WBGene00300518Trichuris murisFrom_analysisWormBase-Compara
WBGene00300522Trichuris murisFrom_analysisWormBase-Compara
WBGene00300595Trichuris murisFrom_analysisWormBase-Compara
WBGene00302527Trichuris murisFrom_analysisWormBase-Compara
HGNC:43734Homo sapiensFrom_analysisOrthoFinder
PhylomeDB
HGNC:43735Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoFinder
Paralog (24)
Structured_descriptionConcise_descriptionhis-70 encodes an H3 histone.Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be located in nucleus. Predicted to be part of nucleosome. Expressed in sperm. Is an ortholog of human H3Y1 (H3.Y histone 1) and H3Y2 (H3.Y histone 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSE03A3.4
Corresponding_CDS_historyE03A3.4:wp214
Corresponding_transcriptE03A3.4.1
Other_sequence (13)
Associated_featureWBsf226459
Experimental_infoRNAi_resultWBRNAi00012658Inferred_automaticallyRNAi_primary
WBRNAi00030478Inferred_automaticallyRNAi_primary
WBRNAi00043624Inferred_automaticallyRNAi_primary
WBRNAi00005658Inferred_automaticallyRNAi_primary
Expr_patternExpr15137
Expr15141
Expr1021654
Expr1147614
Expr2012480
Expr2030719
Regulate_expr_clusterWBPaper00054191:H3.3(null)_embryo_downregulated
WBPaper00054191:H3.3(null)_embryo_upregulated
WBPaper00054191:H3.3(null)_L1_downregulated
WBPaper00054191:H3.3(null)_L1_upregulated
Microarray_results (16)
Expression_cluster (178)
Interaction (12)
Map_infoMapIIIPosition-3.94891Error0.021425
PositivePositive_cloneE03A3Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00019614
WBPaper00038491
WBPaper00052322
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene