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WormBase Tree Display for Gene: WBGene00001243

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Name Class

WBGene00001243SMapS_parentSequenceF41H10
IdentityVersion1
NameCGC_nameelo-5Person_evidenceWBPerson79
Sequence_nameF41H10.7
Molecular_nameF41H10.7
F41H10.7.1
CE49372
Other_nameCELE_F41H10.7Accession_evidenceNDBBX284604
Public_nameelo-5
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:23WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classelo
Allele (40)
StrainWBStrain00035719
WBStrain00035748
WBStrain00035975
RNASeq_FPKM (74)
GO_annotation (17)
OrthologWBGene00064003Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00039072Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00157171Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00143246Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00113484Pristionchus pacificusFrom_analysisOMA
WBGene00162349Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00139292Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00194449Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00146508Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00127035Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00179164Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00211705Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00175438Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00075163Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00068686Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00054467Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00055121Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00120066Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00224269Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7980Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3440Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13933Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g7023Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g6424Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6489Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8817Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3863Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5214Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g5814Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1166Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00113.g4708Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-elo-5Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold494.g2165Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01343.g20240Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_07195.g37481Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11825Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013547Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12483Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g1402Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40332500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g10430Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00241034Onchocerca volvulusFrom_analysisWormBase-Compara
SGD:S000000630Saccharomyces cerevisiaeFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
SGD:S000003732Saccharomyces cerevisiaeFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-030114-1Danio rerioFrom_analysisOMA
OrthoFinder
Panther
ZFIN:ZDB-GENE-040718-309Danio rerioFrom_analysisOMA
OrthoFinder
Panther
ZFIN:ZDB-GENE-031110-3Danio rerioFrom_analysisOMA
OrthoFinder
Panther
Paralog (8)
Structured_descriptionConcise_descriptionThe elo-5 gene encodes a paralog of elo-1 and elo-2, each of which encodes a polyunsaturated fatty acid (PUFA) elongase; ELO-5 is required for normally rapid growth and for normal fatty acid composition.Paper_evidenceWBPaper00004162
WBPaper00005654
WBPaper00005728
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable fatty acid elongase activity. Involved in methyl-branched fatty acid biosynthetic process. Predicted to be located in membrane. Expressed in amphid neurons and intestine.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF41H10.7
Corresponding_CDS_historyF41H10.7a:wp261
Corresponding_transcriptF41H10.7.1
Other_sequence (66)
Associated_featureWBsf230081
WBsf230082
Experimental_infoRNAi_result (46)
Expr_patternExpr3072
Expr4357
Expr1018356
Expr1150911
Expr2011282
Expr2029518
Drives_constructWBCnstr00011114
WBCnstr00011940
WBCnstr00018577
WBCnstr00037016
Construct_productWBCnstr00011114
WBCnstr00018577
WBCnstr00037016
Microarray_results (18)
Expression_cluster (278)
Interaction (91)
Map_infoMapIVPosition1.61467Error0.004
PositivePositive_cloneF41H10Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4281
4282
5450
Pseudo_map_position
Reference (25)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene