Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00000991

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00000991SMapS_parentSequenceM03A8
IdentityVersion1
NameCGC_namedhs-28Person_evidenceWBPerson651
Sequence_nameM03A8.1
Molecular_nameM03A8.1
M03A8.1.1
CE04770
Other_nameCELE_M03A8.1Accession_evidenceNDBBX284606
Public_namedhs-28
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:22WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdhs
Allele (44)
StrainWBStrain00035626
WBStrain00040189
WBStrain00050737
WBStrain00050738
WBStrain00050736
RNASeq_FPKM (74)
GO_annotation (16)
OrthologWBGene00051433Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00032148Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00142852Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00100341Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00123839Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00232261Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g11832Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14578Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14283Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11619Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2749Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20730Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9230Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g491Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g357Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g18778Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_10308.g22579Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-dhs-28Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold320.g803Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00033.g1834Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00290Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024648Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00987Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22038Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0194500Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00245371Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00109947Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00266483Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291758Trichuris murisFrom_analysisWormBase-Compara
WBGene00296581Trichuris murisFrom_analysisWormBase-Compara
WBGene00301657Trichuris murisFrom_analysisWormBase-Compara
SGD:S000001717Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoInspector
PhylomeDB
SonicParanoid
FB:FBgn0030731Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-040421-1Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoInspector
SonicParanoid
HGNC:5213Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoInspector
SonicParanoid
MGI:105089Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoInspector
SonicParanoid
RGD:621806Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoInspector
SonicParanoid
Paralog (38)
Structured_descriptionConcise_descriptiondhs-28 encodes an ortholog of human 17-BETA-HYDROXYSTEROID DEHYDROGENASE 4 (HSD17B4; OMIM:601860, mutated in D-bifunctional protein deficiency), which contains a C-terminal SCP-2 sterol transfer domain; the deletion allele dhs-28(ok450) is superficially wild-type.Paper_evidenceWBPaper00004424
Curator_confirmedWBPerson48
WBPerson1823
WBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable oxidoreductase activity. Involved in several processes, including carbohydrate derivative metabolic process; dauer entry; and positive regulation of developmental process. Located in peroxisome. Expressed in hypodermis. Used to study obesity. Human ortholog(s) of this gene implicated in D-bifunctional protein deficiency; Perrault syndrome; and Stiff-Person syndrome. Is an ortholog of human HSD17B4 (hydroxysteroid 17-beta dehydrogenase 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:9970Homo sapiensPaper_evidenceWBPaper00035972
Curator_confirmedWBPerson38202
Date_last_updated29 Jun 2018 00:00:00
Potential_modelDOID:13366Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:5213)
DOID:0090031Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:5213)
DOID:0050857Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:5213)
Models_disease_assertedWBDOannot00000570
WBDOannot00000571
Molecular_infoCorresponding_CDSM03A8.1
Corresponding_transcriptM03A8.1.1
Other_sequence (107)
Associated_featureWBsf648263
WBsf648264
WBsf662918
WBsf235872
WBsf235873
Experimental_infoRNAi_resultWBRNAi00108444Inferred_automaticallyRNAi_primary
WBRNAi00008998Inferred_automaticallyRNAi_primary
WBRNAi00050847Inferred_automaticallyRNAi_primary
WBRNAi00034393Inferred_automaticallyRNAi_primary
WBRNAi00025981Inferred_automaticallyRNAi_primary
WBRNAi00092604Inferred_automaticallyRNAi_primary
Expr_patternExpr8991
Expr1020554
Expr1030616
Expr1154542
Expr2010912
Expr2029151
Drives_constructWBCnstr00013659
WBCnstr00037154
Construct_product (3)
AntibodyWBAntibody00001955
WBAntibody00002918
Microarray_results (27)
Expression_cluster (216)
Interaction (99)
Map_infoMapXPosition-2.40245Error0.010942
PositivePositive_cloneM03A8Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4258
4343
5031
Pseudo_map_position
Reference (31)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene