WormBase Tree Display for Gene: WBGene00000968

WBGene00000968 SMap: S_parent: Sequence: T05F1
  Identity: Version: 1
    Name (5)
    DB_info: Database: AceView gene 1K224
        WormQTL gene WBGene00000968
        WormFlux gene WBGene00000968
        NDB locus_tag CELE_T05F1.10
        Panther gene CAEEL|WormBase=WBGene00000968|UniProtKB=O18030
          family PTHR24322
        NCBI gene 172810
        RefSeq protein NM_060162.4
        TrEMBL UniProtAcc O18030
        UniProt_GCRP UniProtAcc O18030
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:22 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dhs
    Allele (15)
    RNASeq_FPKM (74)
    GO_annotation: 00031315
      00031316
    Ortholog: WBGene00026559 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00146945 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00070002 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00127640 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00057060 Caenorhabditis remanei From_analysis: TreeFam
      CBOVI.g10778 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g11761 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g3663 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7764 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g13498 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g2298 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8025 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g10095 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g24202 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g603 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00274.g8301 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-dhs-4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15300 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00443.g11451 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11642 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000568 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g18340 Panagrellus redivivus From_analysis: WormBase-Compara
      chrI_pilon.g1870 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00100704 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00117226 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00255850 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291758 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296581 Trichuris muris From_analysis: WormBase-Compara
      WBGene00301657 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000004418 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Inparanoid
            Panther
      SGD:S000002272 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            Panther
      FB:FBgn0029994 Drosophila melanogaster From_analysis: Hieranoid
            OMA
            Panther
      FB:FBgn0031630 Drosophila melanogaster From_analysis: OrthoFinder
            OrthoInspector
            Panther
      FB:FBgn0032910 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      ZFIN:ZDB-GENE-030909-7 Danio rerio From_analysis: EnsEMBL-Compara
            OMA
            Panther
      ZFIN:ZDB-GENE-040426-2049 Danio rerio From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-040426-2861 Danio rerio From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-070112-2242 Danio rerio From_analysis: EnsEMBL-Compara
            OMA
            Panther
      HGNC:30311 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            PhylomeDB
      MGI:2668443 Mus musculus From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            Panther
            PhylomeDB
      RGD:1565999 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            Panther
            PhylomeDB
    Paralog (38)
    Structured_description: Concise_description: dhs-4 encodes a short-chain dehydrogenase predicted to be mitochondrial. Paper_evidence: WBPaper00004424
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Predicted to be located in lipid droplet. Is an ortholog of human SDR16C5 (short chain dehydrogenase/reductase family 16C member 5). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T05F1.10
    Corresponding_CDS_history: T05F1.10:wp43
    Corresponding_transcript: T05F1.10.1
    Other_sequence: CJC16619_1
      Acan_isotig23286
    Associated_feature: WBsf649503
      WBsf649504
      WBsf220120
      WBsf220121
  Experimental_info (7)
  Map_info: Map: I Position: 3.83164 Error: 0.001704
    Positive: Positive_clone: T05F1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5019
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00042257
    WBPaper00050916
    WBPaper00054299
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene