WormBase Tree Display for Gene: WBGene00000960

WBGene00000960 SMap: S_parent: Sequence: F54G8
  Identity: Version: 1
    Name: CGC_name: dgk-3 Person_evidence: WBPerson453
      Sequence_name: F54G8.2
      Molecular_name: F54G8.2
        F54G8.2.1
        CE46230
      Other_name: CELE_F54G8.2 Accession_evidence: NDB BX284603
      Public_name: dgk-3
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:22 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dgk
    Allele (60)
    Strain: WBStrain00035591
    RNASeq_FPKM (74)
    GO_annotation (21)
    Ortholog: WBGene00055153 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00029020 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00190242 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
      WBGene00128871 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00191520 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CBOVI.g5501 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3097 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g2454 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g20098 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3333 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g5776 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16094 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6356 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g13785 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g21166 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g9084 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01049.g15496 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_11197.g23098 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-dgk-3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_01349.g20289 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07475 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009370 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03566 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15410 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30262100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8561 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00109356 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00258682 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00260372 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00295417 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0085390 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-070126-1 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-121105-5 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-060616-305 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:2849 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:2850 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:2853 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:102952 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:105060 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2442474 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:2499 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:2488 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:70904 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00000958 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000959 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00006483 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00019428 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description (2)
  Molecular_info: Corresponding_CDS: F54G8.2
    Corresponding_CDS_history: F54G8.2:wp98
      F54G8.2:wp227
    Corresponding_transcript: F54G8.2.1
    Other_sequence (14)
    Associated_feature: WBsf645468
      WBsf993593
      WBsf993594
      WBsf993595
      WBsf1015556
  Experimental_info: RNAi_result: WBRNAi00048388 Inferred_automatically: RNAi_primary
      WBRNAi00006163 Inferred_automatically: RNAi_primary
      WBRNAi00015668 Inferred_automatically: RNAi_primary
      WBRNAi00032822 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram293
      Expr23
      Expr6186
      Expr11097
      Expr1022527
      Expr1152180
      Expr2010865
      Expr2029103
    Drives_construct: WBCnstr00002601
      WBCnstr00018166
      WBCnstr00037178
    Construct_product: WBCnstr00018166
      WBCnstr00037178
    Microarray_results (22)
    Expression_cluster (91)
    Interaction: WBInteraction000009141
      WBInteraction000049966
      WBInteraction000122632
      WBInteraction000173106
      WBInteraction000382709
      WBInteraction000411402
      WBInteraction000419419
      WBInteraction000439799
      WBInteraction000456311
  Map_info: Map: III Position: 0.250771 Error: 0.010231
    Positive: Positive_clone: F54G8 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4257
        4516
    Pseudo_map_position
  Reference (16)
  Remark: Sequence connection from [Nurrish SJ], [krb 020711]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene