WormBase Tree Display for Gene: WBGene00000733

WBGene00000733 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: F57B1
  Identity: Version: 1
    Name: CGC_name: col-160 Person_evidence: WBPerson345
      Sequence_name: F57B1.4
      Molecular_name: F57B1.4
        F57B1.4.1
        CE31962
        F57B1.4.2
        F57B1.4.3
      Other_name: CELE_F57B1.4 Accession_evidence: NDB BX284605
      Public_name: col-160
    DB_info: Database: AceView gene 5N682
        WormQTL gene WBGene00000733
        WormFlux gene WBGene00000733
        NDB locus_tag CELE_F57B1.4
        Panther gene CAEEL|WormBase=WBGene00000733|UniProtKB=Q20921
          family PTHR24637
        NCBI gene 179804
        RefSeq protein NM_001392637.1
        TrEMBL UniProtAcc Q20921
        UniProt_GCRP UniProtAcc Q20921
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (32)
    RNASeq_FPKM (74)
    GO_annotation: 00069557
      00069558
      00069559
      00107721
    Ortholog: WBGene00058957 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00058958 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00142587 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00105661 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00031110 Caenorhabditis briggsae From_analysis: OMA
      WBGene00031005 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00228353 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g1496 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g1497 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g641 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13384 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g13385 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g14722 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18400 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15784 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g14222 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g18063 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g18444 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g18445 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1847 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g23869 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g9526 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g9527 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_V.g19637 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_V.g19638 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold536.g3319 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      GCK72_017719 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g5584 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50271800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_50271900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g16194 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00122487 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00237999 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00272205 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00288383 Trichuris muris From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-050707-1 Danio rerio From_analysis: Inparanoid
            SonicParanoid
      ZFIN:ZDB-GENE-080303-33 Danio rerio From_analysis: Inparanoid
            SonicParanoid
      RGD:2377 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Inparanoid
    Paralog (161)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F57B1.4
    Corresponding_CDS_history: F57B1.4:wp87
    Corresponding_transcript: F57B1.4.1
      F57B1.4.2
      F57B1.4.3
    Other_sequence (48)
    Associated_feature: WBsf653293
      WBsf1001754
      WBsf1001755
      WBsf1020678
      WBsf1020679
      WBsf1020680
      WBsf234782
  Experimental_info: RNAi_result (7)
    Expr_pattern (5)
    Drives_construct: WBCnstr00037325
    Construct_product: WBCnstr00037325
    Microarray_results (15)
    Expression_cluster (300)
    Interaction (85)
  Map_info: Map: V Position: 4.98296 Error: 0.000815
    Positive: Positive_clone: F57B1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025088
    WBPaper00025192
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene