WormBase Tree Display for Gene: WBGene00000718

WBGene00000718 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: B0222
  Identity: Version: 1
    Name: CGC_name: col-145 Person_evidence: WBPerson345
      Sequence_name: B0222.7
      Molecular_name: B0222.7
        B0222.7.1
        CE48016
      Other_name: CELE_B0222.7 Accession_evidence: NDB BX284605
      Public_name: col-145
    DB_info: Database: AceView gene 5J642
        WormQTL gene WBGene00000718
        WormFlux gene WBGene00000718
        NDB locus_tag CELE_B0222.7
        Panther gene CAEEL|WormBase=WBGene00000718|UniProtKB=Q17459
          family PTHR24637
        NCBI gene 179297
        RefSeq protein NM_072974.8
        SwissProt UniProtAcc Q17459
        TREEFAM TREEFAM_ID TF316783
        UniProt_GCRP UniProtAcc Q17459
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (25)
    RNASeq_FPKM (74)
    GO_annotation: 00058226
      00058227
      00058228
      00058229
      00058230
      00058231
      00107706
    Ortholog: WBGene00038475 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00159676 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00121611 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00138461 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00124289 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00177149 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00093063 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00221975 Brugia malayi From_analysis: WormBase-Compara
      WBGene00223115 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g1744 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g1745 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g1746 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g14354 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g6203 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5159 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4637 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18146 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g26157 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g26158 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g12378 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g2138 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g2151 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g7010 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g23080 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g366 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00424.g10674 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g20129 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g16870 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_06296.g36343 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_017173 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01731 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12367 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g11816 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g18926 Panagrellus redivivus From_analysis: WormBase-Compara
      chrV_pilon.g15187 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00127556 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00210360 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00246154 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00095974 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259395 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00261024 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00261472 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00262484 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00264000 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog (39)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0222.7
    Corresponding_transcript: B0222.7.1
    Other_sequence (38)
    Associated_feature: WBsf652889
      WBsf1000824
      WBsf1020135
      WBsf234190
  Experimental_info (7)
  Map_info: Map: V Position: 1.94734 Error: 0.000151
    Positive: Positive_clone: B0222 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025192
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene