WormBase Tree Display for Gene: WBGene00000109

WBGene00000109 SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 1
    Name: CGC_name: alh-3 Person_evidence: WBPerson651
      Sequence_name: F36H1.6
      Molecular_name: F36H1.6
        F36H1.6.1
        CE40358
      Other_name: CELE_F36H1.6 Accession_evidence: NDB BX284604
      Public_name: alh-3
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: alh
    Allele (42)
    RNASeq_FPKM (74)
    GO_annotation (18)
    Ortholog: WBGene00062509 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00028333 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00074590 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00140465 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00151344 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00120726 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00098433 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g8296 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3489 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g16119 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2191 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23773 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20147 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g17909 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13570 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g27060 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g8881 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1437 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00409.g10461 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_01830.g16761 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-alh-3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8009 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00007.g483 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12841 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014036 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10340 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g12907 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40311100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11744 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00128928 Caenorhabditis japonica From_analysis: WormBase-Compara
      SGD:S000005901 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      SGD:S000005982 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      FB:FBgn0032945 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-100426-6 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-100519-4 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3978 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:26777 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1340024 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2444680 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:621294 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1309458 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog (11)
    Structured_description: Concise_description: alh-3 encodes an aldehyde dehydrogenase predicted to be mitochondrial. Paper_evidence: WBPaper00004424
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable aldehyde dehydrogenase (NAD+) activity and formyltetrahydrofolate dehydrogenase activity. Predicted to be involved in 10-formyltetrahydrofolate catabolic process; biosynthetic process; and one-carbon metabolic process. Predicted to be located in cytoplasm. Is an ortholog of human ALDH1L1 (aldehyde dehydrogenase 1 family member L1) and ALDH1L2 (aldehyde dehydrogenase 1 family member L2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (5)
  Experimental_info: RNAi_result: WBRNAi00014439 Inferred_automatically: RNAi_primary
      WBRNAi00046519 Inferred_automatically: RNAi_primary
      WBRNAi00031873 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028219
      Expr1030057
      Expr1150404
      Expr2009305
      Expr2027541
    Drives_construct: WBCnstr00037725
    Construct_product: WBCnstr00037725
    Microarray_results (24)
    Expression_cluster (131)
    Interaction (67)
  Map_info: Map: IV Position: 4.78347 Error: 0.000714
    Positive: Positive_clone: F36H1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031335
    WBPaper00035664
    WBPaper00036127
    WBPaper00038491
    WBPaper00042257
    WBPaper00055090
    WBPaper00055896
    WBPaper00064989
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene