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WormBase Tree Display for Gene: WBGene00154920

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Name Class

WBGene00154920SMapS_parentSequenceCbre_Contig0
IdentityVersion1
NameCGC_nameCbn-dpy-23From_analysisInferred_from_orthology
Sequence_nameCBN16195
Molecular_nameCBN16195
CBN16195.1
CN22908
Other_nameCBN16195
Public_nameCbn-dpy-23
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-dpy-23
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
RNASeq_FPKMWBls:000000211.0839From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
11.4225From_analysisRNASeq.brenneri.WBls:0000002.control_mean
11.7249From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
12.0345From_analysisRNASeq.brenneri.WBls:0000002.control_median
12.3442From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
13.7697From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
14.212From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
19.9267From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
24.22From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
6.94349From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
WBls:0000004189.436From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
33.4569From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
345.415From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
41.6666From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
42.5429From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
48.9343From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
53.3842From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
55.1702From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:000003829.6683From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
30.1292From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
30.5902From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (16)
WBls:000010112.3442From_analysisRNASeq.brenneri.total_over_all_stages.control_median
27.7995From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00215243
00215244
00215245
OrthologWBGene00001082Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00034945Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00051839Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00095686Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00119617Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g3286Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14982Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g9654Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19126Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15464Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8897Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8454Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g26650Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g11543Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00547.g12092Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-dpy-23Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00002.g147Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00674Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024256Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04790Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14697Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0256800Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00234051Brugia malayiFrom_analysisWormBase-Compara
chrX_pilon.g18913Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00241681Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00266334Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00146871Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147053Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00152832Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00155623Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00158734Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162205Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be part of clathrin adaptor complex. Is an ortholog of C. elegans dpy-23. In C. elegans, dpy-23 is involved in several processes, including necroptotic process; positive regulation of Wnt protein secretion; and protein localization to non-motile cilium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN16195
Corresponding_transcriptCBN16195.1
Other_sequence (56)
Experimental_infoMicroarray_resultsGPL14142_CBN16195_509-568_0.820_60_C
GPL14142_CBN16195_592-651_0.871_30_B
GPL14142_CBN16195_942-1001_0.908_11_A
MethodGene