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WormBase Tree Display for Gene: WBGene00009881

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Name Class

WBGene00009881SMapS_parentSequenceF49C12
IdentityVersion2
NameSequence_nameF49C12.12
Molecular_nameF49C12.12a
F49C12.12a.1
CE03372
F49C12.12b
CE49660
F49C12.12a.2
F49C12.12b.1
Other_namephi-62Person_evidenceWBPerson2582
CELE_F49C12.12Accession_evidenceNDBBX284604
Public_nameF49C12.12
DB_infoDatabaseAceViewgene4K84
WormQTLgeneWBGene00009881
WormFluxgeneWBGene00009881
NDBlocus_tagCELE_F49C12.12
PanthergeneCAEEL|WormBase=WBGene00009881|UniProtKB=Q20589
familyPTHR31733
NCBIgene177755
RefSeqproteinNM_001307112.3
NM_069234.7
TrEMBLUniProtAccQ20589
X5LX67
UniProt_GCRPUniProtAccQ20589
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
217 Mar 2005 13:54:35WBPerson2970Name_changeOther_namephi-62
StatusLive
Gene_infoBiotypeSO:0001217
Allele (14)
RNASeq_FPKM (74)
GO_annotation00068467
00068468
00068469
00117437
00117438
OrthologWBGene00040404Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00128018Caenorhabditis japonicaFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00078911Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00144479Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00150799Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00224480Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g8758Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3948Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16951Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19275Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7926Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g22483Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g2759Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g13918Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g19378Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g20397Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22175Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00213.g7158Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-F49C12.12Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20198Caenorhabditis tropicalisFrom_analysisWormBase-Compara
FL83_10000Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013401Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06618Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4890Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40347510Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g11283Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00239178Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00276991Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00263468Strongyloides rattiFrom_analysisWormBase-Compara
FB:FBgn0262116Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
ZFIN:ZDB-GENE-060825-160Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
PhylomeDB
ZFIN:ZDB-GENE-060825-301Danio rerioFrom_analysisHieranoid
Inparanoid
OrthoInspector
Panther
PhylomeDB
HGNC:33911Homo sapiensFrom_analysisHieranoid
Inparanoid
OrthoInspector
Panther
PhylomeDB
MGI:106369Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
PhylomeDB
RGD:1305687Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
PhylomeDB
ParalogWBGene00016721Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionPredicted to enable RNA endonuclease activity. Predicted to be involved in nucleic acid phosphodiester bond hydrolysis. Predicted to be located in membrane. Is an ortholog of human RNASEK (ribonuclease K).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF49C12.12a
F49C12.12b
Corresponding_transcriptF49C12.12a.1
F49C12.12a.2
F49C12.12b.1
Other_sequence (55)
Associated_featureWBsf652048
WBsf652049
WBsf652050
WBsf230547
WBsf230548
WBsf230549
WBsf230550
Experimental_infoRNAi_resultWBRNAi00064424Inferred_automaticallyRNAi_primary
WBRNAi00091147Inferred_automaticallyRNAi_primary
WBRNAi00094293Inferred_automaticallyRNAi_primary
WBRNAi00025554Inferred_automaticallyRNAi_primary
WBRNAi00071439Inferred_automaticallyRNAi_primary
WBRNAi00094205Inferred_automaticallyRNAi_primary
WBRNAi00047798Inferred_automaticallyRNAi_primary
WBRNAi00065042Inferred_automaticallyRNAi_primary
WBRNAi00085567Inferred_automaticallyRNAi_primary
WBRNAi00091149Inferred_automaticallyRNAi_primary
WBRNAi00008821Inferred_automaticallyRNAi_primary
WBRNAi00064693Inferred_automaticallyRNAi_primary
WBRNAi00091148Inferred_automaticallyRNAi_primary
WBRNAi00076449Inferred_automaticallyRNAi_primary
WBRNAi00091110Inferred_automaticallyRNAi_primary
WBRNAi00071671Inferred_automaticallyRNAi_primary
WBRNAi00091146Inferred_automaticallyRNAi_primary
WBRNAi00064671Inferred_automaticallyRNAi_primary
WBRNAi00025555Inferred_automaticallyRNAi_primary
WBRNAi00066793Inferred_automaticallyRNAi_primary
WBRNAi00008820Inferred_automaticallyRNAi_primary
Expr_patternExpr1018536
Expr1034308
Expr1151633
Expr2003909
Expr2022131
Drives_constructWBCnstr00031848
Construct_productWBCnstr00031848
Microarray_results (22)
Expression_cluster (101)
InteractionWBInteraction000235855
WBInteraction000249498
WBInteraction000409492
WBInteraction000416162
WBInteraction000427112
WBInteraction000438896
WBInteraction000502510
Map_infoPositivePositive_cloneF49C12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV4.16646
ReferenceWBPaper00035228
WBPaper00038491
WBPaper00040412
WBPaper00055090
MethodGene