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WormBase Tree Display for Gene: WBGene00009306

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Name Class

WBGene00009306SMapS_parentSequenceF32A7
IdentityVersion2
NameCGC_namemaph-1.1Person_evidenceWBPerson805
Sequence_nameF32A7.5
Molecular_name (12)
Other_nameCELE_F32A7.5Accession_evidenceNDBBX284601
Public_namemaph-1.1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
203 Jul 2015 12:05:46WBPerson2970Name_changeCGC_namemaph-1.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmaph
Allele (77)
RNASeq_FPKM (74)
GO_annotation (23)
OrthologWBGene00060892Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00038890Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00124426Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00191233Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00148624Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00030065Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g12083Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16158Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g15382Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g7267Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8242Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10994Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g4261Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26065Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2654Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g9279Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18954Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g7878Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g488Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g677Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g9439Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00781.g14097Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_01140.g15794Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_I.g1533Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g1541Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g3791Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold572.g4321Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16616Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18989Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00194.g6728Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01801.g23226Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_04042.g31908Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_08211Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_23694Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001451Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_002211Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_10002200Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_10010800Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40200400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g2979Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00062327Caenorhabditis remaneiFrom_analysisWormBase-Compara
ZFIN:ZDB-GENE-030131-3982Danio rerioFrom_analysisInparanoid
Panther
ZFIN:ZDB-GENE-070912-412Danio rerioFrom_analysisInparanoid
Panther
HGNC:6835Homo sapiensFrom_analysisInparanoid
Panther
HGNC:6836Homo sapiensFrom_analysisInparanoid
Panther
HGNC:15715Homo sapiensFrom_analysisInparanoid
Panther
MGI:1306778Mus musculusFrom_analysisInparanoid
Panther
PhylomeDB
RGD:3043Rattus norvegicusFrom_analysisInparanoid
Panther
PhylomeDB
ParalogWBGene00007966Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00009113Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00018325Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
Structured_descriptionAutomated_descriptionPredicted to enable actin binding activity and microtubule binding activity. Predicted to be involved in microtubule cytoskeleton organization; neuron projection development; and regulation of microtubule depolymerization. Located in microtubule cytoskeleton. Expressed in body wall musculature; egg-laying apparatus; hypodermis; intestinal cell; and neurons. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness and periventricular nodular heterotopia. Is an ortholog of human MAP1A (microtubule associated protein 1A); MAP1B (microtubule associated protein 1B); and MAP1S (microtubule associated protein 1S).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050454Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6836)
DOID:0050564Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6836)
Molecular_infoCorresponding_CDSF32A7.5a
F32A7.5b
F32A7.5c
F32A7.5d
Corresponding_transcriptF32A7.5a.1
F32A7.5b.1
F32A7.5c.1
F32A7.5d.1
Other_sequenceCJC09850_1
CRC06312_1
CR00627
CRC10472_1
CR01632
Associated_featureWBsf657122
WBsf657123
WBsf717609
WBsf986244
WBsf1011301
WBsf218840
Experimental_infoRNAi_resultWBRNAi00025349Inferred_automaticallyRNAi_primary
WBRNAi00090354Inferred_automaticallyRNAi_primary
WBRNAi00046090Inferred_automaticallyRNAi_primary
WBRNAi00113383Inferred_automaticallyRNAi_primary
WBRNAi00107621Inferred_automaticallyRNAi_primary
WBRNAi00092969Inferred_automaticallyRNAi_primary
WBRNAi00025347Inferred_automaticallyRNAi_primary
WBRNAi00042020Inferred_automaticallyRNAi_primary
WBRNAi00089064Inferred_automaticallyRNAi_primary
WBRNAi00095599Inferred_automaticallyRNAi_primary
WBRNAi00025346Inferred_automaticallyRNAi_primary
WBRNAi00089885Inferred_automaticallyRNAi_primary
WBRNAi00003552Inferred_automaticallyRNAi_primary
WBRNAi00100220Inferred_automaticallyRNAi_primary
WBRNAi00100407Inferred_automaticallyRNAi_primary
WBRNAi00113382Inferred_automaticallyRNAi_primary
WBRNAi00090045Inferred_automaticallyRNAi_primary
WBRNAi00090203Inferred_automaticallyRNAi_primary
WBRNAi00090495Inferred_automaticallyRNAi_primary
WBRNAi00031652Inferred_automaticallyRNAi_primary
WBRNAi00025350Inferred_automaticallyRNAi_primary
WBRNAi00113401Inferred_automaticallyRNAi_primary
WBRNAi00090401Inferred_automaticallyRNAi_primary
WBRNAi00113384Inferred_automaticallyRNAi_primary
WBRNAi00100968Inferred_automaticallyRNAi_primary
WBRNAi00114668Inferred_automaticallyRNAi_primary
WBRNAi00099594Inferred_automaticallyRNAi_primary
WBRNAi00100594Inferred_automaticallyRNAi_primary
WBRNAi00099392Inferred_automaticallyRNAi_primary
WBRNAi00025348Inferred_automaticallyRNAi_primary
WBRNAi00090448Inferred_automaticallyRNAi_primary
WBRNAi00100781Inferred_automaticallyRNAi_primary
WBRNAi00114403Inferred_automaticallyRNAi_primary
WBRNAi00073066Inferred_automaticallyRNAi_primary
WBRNAi00099190Inferred_automaticallyRNAi_primary
WBRNAi00100033Inferred_automaticallyRNAi_primary
WBRNAi00113385Inferred_automaticallyRNAi_primary
WBRNAi00107632Inferred_automaticallyRNAi_primary
WBRNAi00089872Inferred_automaticallyRNAi_primary
WBRNAi00099796Inferred_automaticallyRNAi_primary
WBRNAi00003553Inferred_automaticallyRNAi_primary
Expr_patternExpr13645
Expr1025913
Expr1034067
Expr1149977
Expr2013376
Expr2031608
Drives_constructWBCnstr00032296
Construct_productWBCnstr00032296
Microarray_results (30)
Expression_cluster (175)
Interaction (116)
Map_infoMapIPosition27.956
PositivePositive_cloneF32A7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00029395
WBPaper00038491
WBPaper00049959
WBPaper00055090
WBPaper00059214
WBPaper00059548
WBPaper00060754
WBPaper00062248
WBPaper00064789
WBPaper00065165
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene