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WormBase Tree Display for Gene: WBGene00230805

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Name Class

WBGene00230805SMapS_parentSequenceBm_v4_Chr4_scaffold_001
IdentityVersion8
NameCGC_nameBma-unc-34From_analysisInferred_from_orthology
Sequence_nameBm10544
Molecular_nameBm10544a
Bm10544a.1
BM39098
Bm10544b
BM39127
Bm10544c
BM46565
Bm10544b.1
Bm10544c.1
Other_nameTAG10544Curator_confirmedWBPerson4055
TAG6704Curator_confirmedWBPerson4055
TAG13146
Bm10544
Bm1_50610Person_evidenceWBPerson5841
Bm1_50615Person_evidenceWBPerson5841
Public_nameBma-unc-34
SpeciesBrugia malayi
History (2)
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000009730.2307From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
21.0112From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
33.0766From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
34.2545From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
35.6727From_analysisRNASeq.brugia.WBls:0000097.control_mean
36.3611From_analysisRNASeq.brugia.WBls:0000097.control_median
38.4678From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
39.0663From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
48.1596From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
WBls:000007821.6067From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
23.1041From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
24.9418From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
27.1084From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
29.5165From_analysisRNASeq.brugia.WBls:0000078.control_mean
33.7291From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
36.0432From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
40.0823From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
WBls:000008051.5049From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
66.5367From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
76.299From_analysisRNASeq.brugia.WBls:0000080.control_mean
79.893From_analysisRNASeq.brugia.WBls:0000080.control_median
93.2493From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
93.905From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
WBls:0000081 (24)
WBls:000008241.3138From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
52.7764From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
72.4476From_analysisRNASeq.brugia.WBls:0000082.control_mean
85.2124From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
90.1973From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
92.7382From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
WBls:0000083 (82)
WBls:000009273.801From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
74.7908From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
75.7807From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:0000094179.411From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
200.555From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
221.698From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000010138.4678From_analysisRNASeq.brugia.total_over_all_stages.control_median
59.4759From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:000066225.0481From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
33.4353From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
41.8225From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
WBls:000066370.0724From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Contained_in_operonBMOP2410
OrthologWBGene00146192Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164861Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00037397Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g1230Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3850Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g18556Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21961Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10575Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g23677Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10848Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g21517Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g14482Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2737Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-unc-34Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13099Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00850.g16080Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_15264Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_019115Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00851Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7716Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50001200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00006770Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00062141Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00099054Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00128959Caenorhabditis japonicaFrom_analysisWormBase-Compara
chrV_pilon.g13162Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00243953Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00263896Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00296670Trichuris murisFrom_analysisWormBase-Compara
WBGene00302007Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: PH-like domain superfamily; VASP tetramerisation; VASP tetramerisation domain; Vasodilator-stimulated phosphoprotein; WH1 domain; WH1/EVH1 domain; and VASP tetramerisation domain superfamily. Is an ortholog of C. elegans unc-34. In C. elegans, unc-34 is involved in axon development; gonad morphogenesis; and positive regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm10544a
Bm10544b
Bm10544c
Corresponding_transcriptBm10544a.1
Bm10544b.1
Bm10544c.1
Other_sequenceJI170723.1
JI214742.1
SRC00280_1
FC814729.1
Acan_isotig16825
JI470457.1
JI482509.1
FC819459.1
JI171135.1
JI170228.1
Experimental_infoExpression_clusterWBPaper00051007:downregulated_F120_vs_F30
WBPaper00051007:downregulated_M120_vs_F120
WBPaper00061765:Adult_vs_Micro_Downregulated
WBPaper00061765:L3_vs_Adult_Upregulated
WBPaper00061765:L4_vs_Adult_Upregulated
Remark[190208 pad] The CGC name Bma-unc-34 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Bma-unc-34 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene