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WormBase Tree Display for Gene: WBGene00020822

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Name Class

WBGene00020822SMapS_parentSequenceCHROMOSOME_III
IdentityVersion1
NameSequence_nameT26A5.6
Molecular_nameT26A5.6a
T26A5.6a.1
CE29822
T26A5.6b
CE54538
T26A5.6b.1
Other_nameCELE_T26A5.6Accession_evidenceNDBBX284603
Public_nameT26A5.6
DB_infoDatabaseAceViewgene3H538
WormQTLgeneWBGene00020822
WormFluxgeneWBGene00020822
NDBlocus_tagCELE_T26A5.6
PanthergeneCAEEL|WormBase=WBGene00020822|UniProtKB=Q22794
familyPTHR31017
NCBIgene175917
RefSeqproteinNM_001420553.1
NM_066015.7
TrEMBLUniProtAccA0A8S4SRX5
Q22794
UniProt_GCRPUniProtAccA0A8S4SRX5
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (35)
RNASeq_FPKM (74)
GO_annotation00076416
Contained_in_operonCEOP3384
OrthologWBGene00038852Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00055490Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00164083Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00124341Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00226279Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g4824Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g15843Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g12246Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g141Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g8230Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g13385Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g18082Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1475Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP40.g3640Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00228.g7422Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-T26A5.6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17490Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00051.g2621Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16458Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010705Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08100Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5776Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30173200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g7943Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00246297Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00092500Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00258534Strongyloides rattiFrom_analysisWormBase-Compara
SGD:S000004104Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0030499Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-060825-261Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:28994Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1926187Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1564615Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionAutomated_descriptionPredicted to be located in cytoplasm. Is an ortholog of human AVL9 (AVL9 cell migration associated).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST26A5.6a
T26A5.6b
Corresponding_transcriptT26A5.6a.1
T26A5.6b.1
Other_sequenceTcol_isotig03570
BXC04661_1
ACC09841_1
JI215604.1
Tcol_isotig03574
Tcol_isotig03569
Tcol_isotig03572
Dviv_isotig19371
EX555381.1
FC554329.1
EX559282.1
Acan_isotig09627
Tcol_isotig03573
Oden_isotig19367
HC08129
HCC08912_1
Tcol_isotig03566
Tcol_isotig03567
Tcol_isotig03571
Tcol_isotig03568
FC548815.1
Associated_featureWBsf651130
WBsf666999
WBsf992767
WBsf226829
Experimental_infoRNAi_resultWBRNAi00054168Inferred_automaticallyRNAi_primary
WBRNAi00019241Inferred_automaticallyRNAi_primary
WBRNAi00035981Inferred_automaticallyRNAi_primary
WBRNAi00005377Inferred_automaticallyRNAi_primary
WBRNAi00008133Inferred_automaticallyRNAi_primary
Expr_patternExpr1014703
Expr1039071
Expr1157714
Expr2006518
Expr2024737
Drives_constructWBCnstr00024860
Construct_productWBCnstr00024860
Microarray_results (19)
Expression_cluster (89)
Interaction (13)
Map_infoPositivePositive_cloneT26A5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-1.26298
ReferenceWBPaper00038491
WBPaper00055090
MethodGene