WormBase Tree Display for Gene: WBGene00012471

WBGene00012471 SMap: S_parent: Sequence: Y17G7B
  Identity: Version: 1
    Name (4)
    DB_info: Database: AceView gene 2M268
        WormQTL gene WBGene00012471
        WormFlux gene WBGene00012471
        NDB locus_tag CELE_Y17G7B.20
        NCBI gene 174837
        RefSeq protein NM_001129179.3
            NM_001393207.1
            NM_001393206.1
        TREEFAM TREEFAM_ID TF105008
        TrEMBL UniProtAcc A8XJ46
            A8XJ47
            Q8I4E8
        UniProt_GCRP UniProtAcc Q8I4E8
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (81)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP2582
    Ortholog: WBGene00039912 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00054436 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00161538 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00131278 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00159625 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g6252 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15814 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g12013 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1374 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g8911 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g27114 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3110 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21427 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1096 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g5692 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-Y17G7B.20 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00624.g13693 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_09785 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006602 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_20060800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g6076 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including ABalpapaap; AVK; germ line; pharyngeal neurons; and sensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-12; hsf-1; and gld-1 based on microarray and RNA-seq studies. Is affected by five chemicals including Aspirin; Rifampin; and paraquat based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y17G7B.20a
      Y17G7B.20b
      Y17G7B.20c
    Corresponding_CDS_history: Y17G7B.20d:wp275
      Y17G7B.20e:wp275
    Corresponding_transcript: Y17G7B.20a.1
      Y17G7B.20a.2
      Y17G7B.20a.3
      Y17G7B.20b.1
      Y17G7B.20c.1
      Y17G7B.20c.2
      Y17G7B.20c.3
    Other_sequence: EX565437.1
      Name_isotig00089
      Oden_isotig05908
      EX541209.1
      Tcir_isotig06872
      NAC01016_1
      Name_isotig00088
      CRC06818_1
      BU666399.1
      Tcol_isotig02560
      Dviv_isotig15311
      CJC16906_1
      EX545325.1
      CJC03832_1
      FC547679.1
      BU666411.1
      EX558356.1
      CR06777
      PPC17859_1
      Oden_isotig05909
      ACC04141_2
      CR01599
      Oden_isotig05906
      CBC00263_1
      Oden_isotig05907
      Hbac_isotig04218
      CRC04067_1
      CBC09933_1
      AYC02242_1
      NB06902
      NB07269
      AE00830
      BU086603.1
      NBC03282_1
      EX557914.1
      NBC05176_1
    Associated_feature: WBsf650638
      WBsf666218
      WBsf976371
      WBsf976372
      WBsf976373
      WBsf224019
      WBsf224020
      WBsf224021
      WBsf224022
  Experimental_info: RNAi_result: WBRNAi00107416 Inferred_automatically: RNAi_primary
      WBRNAi00002080 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015314
      Expr1035522
      Expr1159084
      Expr2007109
      Expr2025337
    Microarray_results (19)
    Expression_cluster (121)
    Interaction: WBInteraction000523808
      WBInteraction000533257
      WBInteraction000534335
      WBInteraction000534536
      WBInteraction000534581
      WBInteraction000535087
  Map_info: Positive: Positive_clone: Y17G7B Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 5.45193
  Method: Gene