WormBase Tree Display for Gene: WBGene00011761

WBGene00011761 SMap: S_parent: Sequence: T13H5
  Identity: Version: 1
    Name: Sequence_name: T13H5.8
      Molecular_name: T13H5.8
        T13H5.8.1
        CE28961
      Other_name: CELE_T13H5.8 Accession_evidence: NDB BX284602
      Public_name: T13H5.8
    DB_info: Database: AceView gene 2I809
        WormQTL gene WBGene00011761
        WormFlux gene WBGene00011761
        NDB locus_tag CELE_T13H5.8
        Panther gene CAEEL|WormBase=WBGene00011761|UniProtKB=Q95QB1
          family PTHR21347
        NCBI gene 174362
        RefSeq protein NM_063396.6
        TREEFAM TREEFAM_ID TF318501
        TrEMBL UniProtAcc Q95QB1
        UniProt_GCRP UniProtAcc Q95QB1
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (24)
    RNASeq_FPKM (74)
    GO_annotation: 00088292
      00088293
      00088294
      00088295
      00118998
    Contained_in_operon: CEOP2356
    Ortholog: WBGene00027366 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00053907 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00142246 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00185035 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00208170 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00112911 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00226042 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g7367 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10302 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g16283 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g18017 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10293 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g21883 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16771 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12542 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g15977 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g4870 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g12846 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00569.g12331 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-T13H5.8 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21365 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01172.g18985 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_04588 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_004960 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02201 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g9619 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20132110 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5271 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00247647 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00304460 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00258514 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292012 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0030456 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040718-75 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:24308 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2442892 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1307896 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00011302 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00016469 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: T13H5.8 is the closest C. elegans homolog of the human gene CRR9, which promotes cisplatin-induced apoptosis in ovarian cancer cells, and of CLPTM1, a human gene associated with cleft lip and palate. Paper_evidence: WBPaper00012845
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be located in endomembrane system and membrane. Human ortholog(s) of this gene implicated in carcinoma (multiple) and pulmonary emphysema. Is an ortholog of human CLPTM1L (CLPTM1 like). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model (11)
  Molecular_info: Corresponding_CDS: T13H5.8
    Corresponding_transcript: T13H5.8.1
    Other_sequence: FC540070.1
      Tcol_isotig00716
      BM277697.1
      BG577760.1
      EY460236.1
      XI03166
      FC555454.1
      CR05556
      FC539464.1
      ES742175.1
      Tcol_isotig00721
      FG620043.1
      EX545591.1
      CR04942
      JI169488.1
      Tcol_isotig00717
      FC555408.1
      Oden_isotig17251
      JI166355.1
      Acan_isotig03243
      Tcol_isotig00719
      ACC13125_2
      XIC02067_1
      CRC04529_1
      FK808581.1
      FF679760.1
      Acan_isotig03242
      EX828155.1
      FK806019.1
      Dviv_isotig25454
      ACC13125_1
      XI04069
      Hbac_isotig01666
      FC539477.1
      Oden_isotig17252
      Tcir_isotig16536
      TMC00383_1
      HBC10398_1
      EX542122.1
      Name_isotig04680
      Tcol_contig04318
    Associated_feature: WBsf988755
      WBsf221761
  Experimental_info: RNAi_result: WBRNAi00053302 Inferred_automatically: RNAi_primary
      WBRNAi00018697 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015644
      Expr1035178
      Expr1156888
      Expr2006166
      Expr2024382
    Drives_construct: WBCnstr00030408
    Construct_product: WBCnstr00030408
    Microarray_results (19)
    Expression_cluster (96)
    SAGE_tag (12)
    Interaction: WBInteraction000234388
      WBInteraction000570731
      WBInteraction000582499
  Map_info: Positive: Positive_clone: T13H5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.814655
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene