WormBase Tree Display for Gene: WBGene00007402

WBGene00007402 SMap: S_parent: Sequence: C07A9
  Identity: Version: 2
    Name: CGC_name: ugt-60 Person_evidence: WBPerson1208
            WBPerson655
      Sequence_name: C07A9.6
      Molecular_name: C07A9.6
        C07A9.6.1
        CE33970
      Other_name: CELE_C07A9.6 Accession_evidence: NDB BX284603
      Public_name: ugt-60
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 10 Jun 2005 11:17:00 WBPerson2970 Name_change: CGC_name: ugt-60
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ugt
    Allele (25)
    Strain: WBStrain00037374
    RNASeq_FPKM (74)
    GO_annotation: 00041582
      00041583
      00041584
      00041585
      00041586
      00041587
      00041588
      00115538
    Contained_in_operon: CEOP3614
    Ortholog: WBGene00055048 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00031508 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00126016 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP21.g810 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8159 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g14040 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3222 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g5161 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12870 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7248 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1472 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3419 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00271.g8243 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-ugt-60 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9348 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00091.g3981 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_009489 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g14385 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g17912 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30197810 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8677 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00276328 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00290976 Trichuris muris From_analysis: WormBase-Compara
      WBGene00302924 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0042179 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Panther
      HGNC:28183 Homo sapiens From_analysis: EnsEMBL-Compara
            OMA
            Panther
      MGI:109522 Mus musculus From_analysis: EnsEMBL-Compara
            Panther
            PhylomeDB
      RGD:3938 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Panther
            PhylomeDB
    Paralog (73)
    Structured_description: Automated_description: Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Is an ortholog of human UGT2A2 (UDP glucuronosyltransferase family 2 member A2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C07A9.6
    Corresponding_CDS_history: C07A9.6:wp17
      C07A9.6a:wp100
      C07A9.6b:wp100
    Corresponding_transcript: C07A9.6.1
    Other_sequence: MC02192
      FC815228.1
      FC548744.1
      Tcol_isotig16091
      FC548819.1
      FC552512.1
      HG01121
      SRC00504_1
      MH05434
      MCC03046_1
      Oden_isotig29529
      EX828561.1
      Oden_isotig24896
      SR02917
      BXC06038_1
      HGC04607_1
      SR01687
      HBC28636_1
      EX009953.1
      MH05199
      ACC09886_1
      FC540442.1
      MHC10545_1
      SRC02583_1
      FC817404.1
      PPC19779_1
      EX828260.1
      Acan_isotig12687
      FC542706.1
      FC811826.1
    Associated_feature: WBsf651393
      WBsf651394
      WBsf667312
      WBsf993763
      WBsf1015650
      WBsf227344
      WBsf227345
      WBsf227346
  Experimental_info: RNAi_result: WBRNAi00028619 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012621
      Expr1033187
      Expr1144057
      Expr2017808
      Expr2035945
    Drives_construct: WBCnstr00033768
    Construct_product: WBCnstr00033768
    Microarray_results (16)
    Expression_cluster (138)
    Interaction (2)
  Map_info: Map: III Position: 0.863984 Error: 0.008233
    Positive: Positive_clone: C07A9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00055433
    WBPaper00062838
    WBPaper00064707
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene