WormBase Tree Display for Gene: WBGene00150453

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WBGene00150453	SMap	S_parent	Sequence	Cbre_Contig89
	Identity	Version	1
		Name	CGC_name	Cbn-unc-27	From_analysis	Inferred_from_orthology
			Sequence_name	CBN11728
			Molecular_name	CBN11728
				CBN11728.1
				CN03649
			Other_name	CBN11728
			Public_name	Cbn-unc-27
		Species	Caenorhabditis brenneri
		History	Version_change	1	30 Oct 2008 10:39:29	WBPerson4055	Event	Imported	from NGASP
							Name_change	CGC_name	Cbn-unc-27
		Status	Live
	Gene_info	Biotype	SO:0001217
		Gene_class	unc
		RNASeq_FPKM	WBls:0000002 (11)
			WBls:0000004	13.2227	From_analysis	RNASeq.brenneri.WBls:0000004.control_mean
						RNASeq.brenneri.WBls:0000004.control_median
				0	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
				26.4455	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
			WBls:0000024	0	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
				255.806	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
				325.932	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
				346.977	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
				418.732	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
				506.244	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
			WBls:0000038	1017.4	From_analysis	RNASeq.brenneri.WBls:0000038.control_mean
						RNASeq.brenneri.WBls:0000038.control_median
				1054.66	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
				980.138	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
			WBls:0000041	1126.02	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
				0	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
						RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
				406.593	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
				475.931	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
				638.625	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
				650.665	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
				691.086	From_analysis	RNASeq.brenneri.WBls:0000041.control_mean
				701.908	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
				766.866	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
				790.721	From_analysis	RNASeq.brenneri.WBls:0000041.control_median
				814.575	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
				850.606	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
				862.537	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
				864.377	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
				928.067	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
				975.329	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
				995.271	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
			WBls:0000101	406.593	From_analysis	RNASeq.brenneri.total_over_all_stages.control_median
				483.643	From_analysis	RNASeq.brenneri.total_over_all_stages.control_mean
		GO_annotation	00211698
		Ortholog	WBGene00006764	Caenorhabditis elegans	From_analysis	OMA
						TreeFam
						Inparanoid_8
						WormBase-Compara
			WBGene00035711	Caenorhabditis briggsae	From_analysis	OMA
						Inparanoid_8
						WormBase-Compara
			WBGene00070603	Caenorhabditis remanei	From_analysis	OMA
						TreeFam
						Inparanoid_8
						WormBase-Compara
			WBGene00099181	Pristionchus pacificus	From_analysis	OMA
			WBGene00099182	Pristionchus pacificus	From_analysis	OMA
						WormBase-Compara
			WBGene00109023	Pristionchus pacificus	From_analysis	OMA
						Inparanoid_8
						WormBase-Compara
			WBGene00120959	Caenorhabditis japonica	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
			CBOVI.g3615	Caenorhabditis bovis	From_analysis	WormBase-Compara
			CSP21.g11325	Caenorhabditis parvicauda	From_analysis	WormBase-Compara
			CSP26.g663	Caenorhabditis zanzibari	From_analysis	WormBase-Compara
			CSP28.g11706	Caenorhabditis panamensis	From_analysis	WormBase-Compara
			CSP28.g16797	Caenorhabditis panamensis	From_analysis	WormBase-Compara
			CSP29.g17160	Caenorhabditis becei	From_analysis	WormBase-Compara
			CSP29.g23558	Caenorhabditis becei	From_analysis	WormBase-Compara
			CSP31.g24667	Caenorhabditis uteleia	From_analysis	WormBase-Compara
			CSP32.g4780	Caenorhabditis sulstoni	From_analysis	WormBase-Compara
			CSP38.g94	Caenorhabditis quiockensis	From_analysis	WormBase-Compara
			CSP39.g12284	Caenorhabditis waitukubuli	From_analysis	WormBase-Compara
			CSP39.g17964	Caenorhabditis waitukubuli	From_analysis	WormBase-Compara
			CSP40.g18709	Caenorhabditis tribulationis	From_analysis	WormBase-Compara
			Cang_2012_03_13_00239.g7645	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cni-unc-27	Caenorhabditis nigoni	From_analysis	WormBase-Compara
			Csp11.Scaffold629.g10942	Caenorhabditis tropicalis	From_analysis	WormBase-Compara
			Csp5_scaffold_00049.g2532	Caenorhabditis sinica	From_analysis	WormBase-Compara
			FL83_02091	Caenorhabditis latens	From_analysis	WormBase-Compara
			GCK72_025235	Caenorhabditis remanei	From_analysis	WormBase-Compara
			OTIPU.nOt.2.0.1.g00394	Oscheius tipulae	From_analysis	WormBase-Compara
			Pan_g19272	Panagrellus redivivus	From_analysis	WormBase-Compara
			Sp34_X0172300	Caenorhabditis inopinata	From_analysis	WormBase-Compara
			WBGene00227801	Brugia malayi	From_analysis	WormBase-Compara
			chrX_pilon.g19642	Caenorhabditis elegans	From_analysis	WormBase-Compara
			WBGene00242556	Onchocerca volvulus	From_analysis	WormBase-Compara
			WBGene00272388	Pristionchus pacificus	From_analysis	WormBase-Compara
			WBGene00277836	Pristionchus pacificus	From_analysis	WormBase-Compara
			WBGene00267557	Strongyloides ratti	From_analysis	WormBase-Compara
			WBGene00291450	Trichuris muris	From_analysis	WormBase-Compara
		Paralog	WBGene00142179	Caenorhabditis brenneri	From_analysis	TreeFam
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00158790	Caenorhabditis brenneri	From_analysis	TreeFam
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00161700	Caenorhabditis brenneri	From_analysis	TreeFam
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00154374	Caenorhabditis brenneri	From_analysis	TreeFam
						WormBase-Compara
						GeneACeDB-Compara
		Structured_description	Automated_description	Predicted to be part of troponin complex. Is an ortholog of C. elegans unc-27. In C. elegans, unc-27 is involved in locomotion and sarcomere organization.	Paper_evidence	WBPaper00065943
					Curator_confirmed	WBPerson324
						WBPerson37462
					Inferred_automatically	This description was generated automatically by a script based on data from the WS291 version of WormBase
					Date_last_updated	29 Nov 2023 00:00:00
	Molecular_info	Corresponding_CDS	CBN11728
		Corresponding_transcript	CBN11728.1
		Other_sequence	CBC01355_1
			FD515120.1
			DA03415
			GW406631.1
			AA294408.1
			SSC03968_1
			AW682824.1
			BE720878.1
			MIC00198_1
			FD515832.1
			AS14582
			BE346032.1
			JI172962.1
			TCC00272_1
			AW980145.1
			OVC04395_2
			GO239640.1
			BE760969.1
			PTC03639_1
			HS01322
			XIC01467_1
			SSC01171_1
			PPC00959_1
			HBC00529_1
			ES744332.1
			Acan_isotig20035
			AI130088.1
			ACC25981_1
			AI124144.1
			ES409608.1
			CSC00558_1
			HC04422
			TSC00427_1
			BE552480.1
			HG00555
			ZP00041
			AI124143.1
			GE638413.1
			AW980277.1
			Tcol_isotig22041
			AS02566
			BU586957.1
			CRC05830_1
			EX541370.1
			AA294738.1
			BMC01257_1
			ZPC00008_1
			CJC15537_1
			Hbac_isotig02896
			HC01929
			ES412726.1
			OOC00679_1
			Oden_isotig17886
			PT00345
			BE125002.1
			BUC00547_1
			ES412110.1
			OVC04395_1
			EX009089.1
			HS00182
			FD514317.1
			FG349312.1
			PSC02079_1
			MI01978
			Tcol_isotig15486
			PT02983
			HGC07425_1
			Dviv_isotig23534
			HSC01074_1
			ACC00248_1
			OVC00339_1
			MI00847
			EX912386.1
			TX00161
			MCC05436_1
			ES411573.1
			ES744159.1
			JI180422.1
			AA934292.1
			GRC01522_1
			JI463165.1
			EX543174.1
			PPC05300_1
			BE720890.1
			AI130096.1
			JO467657.1
			AW980245.1
			GR12567
			ES410355.1
			BE636492.1
			AW208333.1
			FG581440.1
			AI096016.1
			ASC11232_1
			PT00350
			PTC02991_1
			AW355764.1
			AW257582.1
			BE202261.1
			AI124149.1
			CK854772.1
			PPC09497_1
			WBC02194_1
			EX557424.1
			PTC03589_1
			BE095343.1
			AA934272.1
			EX912329.1
			CJC02979_1
			ES743461.1
			CJC00377_1
			HCC00287_1
			PPC04831_1
			AA915841.1
			BE346047.1
			R95399.1
			AA720438.1
			Acan_isotig06985
			CR01985
			ALC00979_1
			AI130355.1
			EX008899.1
			EX547172.1
			GE639475.1
			AW682845.1
			FD515046.1
			FG620593.1
			HC00371
			BE132491.1
			NB06625
			AA190261.1
			Name_isotig03735
			NBC00246_1
			AI692152.1
			BE132624.1
			MIC00198_2
			GE638880.1
			ASC00790_1
			EX007703.1
			EX910802.1
			BXC00029_1
			AS12483
			MC00934
			DAC00125_1
			XI00860
			BXC01343_1
			SS01499
			PT00480
	Experimental_info	Microarray_results	GPL14142_CBN11728_49-108_0.892_17_C
			GPL14142_CBN11728_240-299_0.921_4_B
			GPL14142_CBN11728_577-636_0.928_3_A
	Method	Gene