WormBase Tree Display for Gene: WBGene00013294
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WBGene00013294 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | pals-30 | Person_evidence | WBPerson260 | |||||
Sequence_name | Y57G11B.1 | ||||||||
Molecular_name | Y57G11B.1 | ||||||||
WP:CE16665 | |||||||||
CE16665 | |||||||||
Y57G11B.1.1 | |||||||||
Other_name | CELE_Y57G11B.1 | Accession_evidence | NDB | BX284604 | |||||
Public_name | pals-30 | ||||||||
DB_info | Database | AceView | gene | 4P306 | |||||
WormQTL | gene | WBGene00013294 | |||||||
WormFlux | gene | WBGene00013294 | |||||||
NDB | locus_tag | CELE_Y57G11B.1 | |||||||
NCBI | gene | 190365 | |||||||
RefSeq | mRNA | NM_070365.1 | |||||||
protein | NP_502766.1 | ||||||||
NM_070365.2 | |||||||||
TREEFAM | TREEFAM_ID | TF322379 | |||||||
UniProt | UniProtAcc | G5EF79 | |||||||
TrEMBL | UniProtAcc | G5EF79 | |||||||
UniProt_GCRP | UniProtAcc | G5EF79 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 26 Oct 2016 09:42:35 | WBPerson2970 | Name_change | CGC_name | pals-30 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pals | ||||||||
Allele (97) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP4603 | ||||||||
Ortholog | WBGene00142109 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||
WBGene00161337 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
WBGene00061028 | Caenorhabditis remanei | From_analysis | OMA | ||||||
Sp34_30320300 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
chrIV_pilon.g12495 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (11) | |||||||||
Structured_description | Automated_description | Enriched in NSM based on tiling array studies. Is affected by several genes including daf-16; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including Mercuric Chloride; Psoralens; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y57G11B.1 | |||||||
Corresponding_transcript | Y57G11B.1.1 | ||||||||
Associated_feature | WBsf1018665 | ||||||||
WBsf1018666 | |||||||||
Experimental_info | RNAi_result | WBRNAi00037589 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021130 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00057676 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1025596 | ||||||||
Expr1161082 | |||||||||
Expr2014702 | |||||||||
Expr2032938 | |||||||||
Drives_construct | WBCnstr00029707 | ||||||||
Construct_product | WBCnstr00029707 | ||||||||
Microarray_results (13) | |||||||||
Expression_cluster (128) | |||||||||
Interaction (104) | |||||||||
Map_info | Positive | Positive_clone | Y57G11B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 12.2282 | |||||||
Reference (2) | |||||||||
Method | Gene |