WormBase Tree Display for Gene: WBGene00021496
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| WBGene00021496 | SMap | S_parent | Sequence | Y40C5A | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | daf | |||||
| Allele (142) | ||||||
| RNASeq_FPKM (74) | ||||||
| Ortholog (19) | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaappppa; ABalapaappa; ABalapapapa; ABalapappaa; and anterior ganglion (post) based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by four chemicals including Zidovudine; sucrose; and stearic acid based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS (17) | |||||
| Corresponding_CDS_history | Y40C5A.3:wp203 | |||||
| Y40C5A.3:wp208 | ||||||
| Y40C5A.3a:wp241 | ||||||
| Y40C5A.3b:wp241 | ||||||
| Corresponding_transcript (17) | ||||||
| Other_sequence (27) | ||||||
| Associated_feature | WBsf651906 | |||||
| WBsf668014 | ||||||
| WBsf996941 | ||||||
| WBsf996942 | ||||||
| WBsf1017688 | ||||||
| WBsf1017689 | ||||||
| Experimental_info | RNAi_result | WBRNAi00020449 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00020450 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00020451 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00056325 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00020447 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00059962 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00059961 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00059963 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00020446 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00059964 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr16428 | |||||
| Expr1024795 | ||||||
| Expr1039394 | ||||||
| Expr1159813 | ||||||
| Expr2007417 | ||||||
| Expr2025653 | ||||||
| Drives_construct | WBCnstr00043013 | |||||
| Construct_product | WBCnstr00043013 | |||||
| Microarray_results (17) | ||||||
| Expression_cluster (108) | ||||||
| Map_info | Map | IV | Position | 3.32865 | ||
| Positive | Positive_clone | Y40C5A | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00057489 | |||||
| WBPaper00062835 | ||||||
| WBPaper00065378 | ||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
