WormBase Tree Display for Gene: WBGene00017398
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WBGene00017398 | SMap | S_parent | Sequence | F12B6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | slc-17.6 | Person_evidence | WBPerson260 | |||
Sequence_name | F12B6.2 | ||||||
Molecular_name | F12B6.2a | ||||||
F12B6.2a.1 | |||||||
CE30512 | |||||||
F12B6.2c | |||||||
CE30513 | |||||||
F12B6.2f | |||||||
CE49739 | |||||||
F12B6.2c.1 | |||||||
F12B6.2d | |||||||
F12B6.2e | |||||||
F12B6.2f.1 | |||||||
Other_name | CELE_F12B6.2 | Accession_evidence | NDB | BX284601 | |||
Public_name | slc-17.6 | ||||||
DB_info | Database | AceView | gene | 1C821 | |||
WormQTL | gene | WBGene00017398 | |||||
WormFlux | gene | WBGene00017398 | |||||
NDB | locus_tag | CELE_F12B6.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00017398|UniProtKB=H2KZQ1 | |||||
family | PTHR11662 | ||||||
NCBI | gene | 171781 | |||||
RefSeq | protein | NM_171833.6 | |||||
NM_058546.6 | |||||||
NM_001306429.3 | |||||||
NR_131354.1 | |||||||
NR_131353.1 | |||||||
TrEMBL | UniProtAcc | H2KZQ3 | |||||
X5M917 | |||||||
H2KZQ1 | |||||||
UniProt_GCRP | UniProtAcc | H2KZQ1 | |||||
RNAcentral | URSid | URS0000730A4E | |||||
URS000073A07E | |||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | slc | ||||||
Allele (115) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00022470 | ||||||
00022471 | |||||||
00022472 | |||||||
00022473 | |||||||
00105567 | |||||||
00122811 | |||||||
00122812 | |||||||
Ortholog (32) | |||||||
Paralog (58) | |||||||
Structured_description | Automated_description | Predicted to enable transmembrane transporter activity. Predicted to be involved in monoatomic anion transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F12B6.2a | |||||
F12B6.2c | |||||||
F12B6.2f | |||||||
Corresponding_CDS_history (2) | |||||||
Corresponding_transcript | F12B6.2d | ||||||
F12B6.2e | |||||||
F12B6.2a.1 | |||||||
F12B6.2c.1 | |||||||
F12B6.2f.1 | |||||||
Associated_feature | WBsf656039 | ||||||
WBsf982834 | |||||||
WBsf1009312 | |||||||
Experimental_info | RNAi_result | WBRNAi00003367 | Inferred_automatically | RNAi_primary | |||
WBRNAi00004604 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00044431 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1024173 | ||||||
Expr1148377 | |||||||
Expr2015862 | |||||||
Expr2034095 | |||||||
Drives_construct | WBCnstr00027326 | ||||||
Construct_product | WBCnstr00027326 | ||||||
Microarray_results (39) | |||||||
Expression_cluster (157) | |||||||
Interaction | WBInteraction000139974 | ||||||
WBInteraction000219263 | |||||||
WBInteraction000234295 | |||||||
WBInteraction000289610 | |||||||
WBInteraction000334184 | |||||||
WBInteraction000371082 | |||||||
WBInteraction000468500 | |||||||
WBInteraction000468501 | |||||||
WBInteraction000581014 | |||||||
Map_info | Map | I | Position | -10.5915 | |||
Positive | Positive_clone | F12B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |