WormBase Tree Display for Gene: WBGene00022731
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WBGene00022731 | SMap | S_parent | Sequence | ZK402 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (40) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog | WBGene00039293 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||
WBGene00023828 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||
WBGene00069550 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||
WBGene00036139 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | |||
WBGene00124063 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||
WBGene00057293 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||
chrX_pilon.g18429 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
chrX_pilon.g18430 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
chrX_pilon.g18431 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Paralog (37) | ||||||
Structured_description | Automated_description | Enriched in several structures, including ABplppppaa; ABprppppaa; germline precursor cell; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; glp-1; and let-60 based on RNA-seq and microarray studies. Is affected by twelve chemicals including stearic acid; sucrose; and Doxycycline based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info (4) | ||||||
Experimental_info | RNAi_result | WBRNAi00022001 | Inferred_automatically | RNAi_primary | ||
WBRNAi00012482 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00021999 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00059411 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00043308 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00082475 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00021998 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00082672 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00059409 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1162840 | |||||
Expr2008834 | ||||||
Expr2027068 | ||||||
Drives_construct | WBCnstr00024018 | |||||
Construct_product | WBCnstr00024018 | |||||
Microarray_results | SMD_ZK402.5 | |||||
172408_x_at | ||||||
172409_x_at | ||||||
172410_x_at | ||||||
183757_at | ||||||
A_12_P110556 | ||||||
Aff_ZK402.5 | ||||||
GPL14144_ZK402.2_226-285_0.939_1_A | ||||||
GPL19516_CGZ0056838 | ||||||
GPL19516_CGZ0056840 | ||||||
GPL21109_ZK402.2 | ||||||
GPL21109_ZK402.5 | ||||||
GPL3518_CE05077 | ||||||
GPL8304_CE_WBGene00022731_A | ||||||
GPL8673_ZK402_1P00006 | ||||||
GPL8673_ZK402_1P00065 | ||||||
GPL8673_ZK402_2P00175 | ||||||
GPL8673_ZK402_5P00594 | ||||||
GPL8673_ZK402_5P01100 | ||||||
GPL8673_ZK402_5P01301 | ||||||
GPL9450_ZK402.5 | ||||||
cea2.i.59083 | ||||||
Expression_cluster (95) | ||||||
Interaction | WBInteraction000216581 | |||||
WBInteraction000227158 | ||||||
Map_info | Positive | Positive_clone | ZK402 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | X | -18.1707 | ||||
Method | Gene |