WormBase Tree Display for Gene: WBGene00022331
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WBGene00022331 | SMap | S_parent | Sequence | Y82E9BL | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fbxa-19 | Person_evidence | WBPerson655 | |||||
Sequence_name | Y82E9BL.15 | ||||||||
Molecular_name | Y82E9BL.15 | ||||||||
Y82E9BL.15.1 | |||||||||
CE52829 | |||||||||
Other_name | CELE_Y82E9BL.15 | Accession_evidence | NDB | BX284603 | |||||
Public_name | fbxa-19 | ||||||||
DB_info | Database | AceView | gene | 3C407 | |||||
WormQTL | gene | WBGene00022331 | |||||||
WormFlux | gene | WBGene00022331 | |||||||
NDB | locus_tag | CELE_Y82E9BL.15 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00022331|UniProtKB=Q95XB8 | |||||||
family | PTHR23015 | ||||||||
NCBI | gene | 190762 | |||||||
RefSeq | protein | NM_001368615.2 | |||||||
TREEFAM | TREEFAM_ID | TF322006 | |||||||
TrEMBL | UniProtAcc | Q95XB8 | |||||||
UniProt_GCRP | UniProtAcc | Q95XB8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-19 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxa | ||||||||
Allele (96) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (34) | |||||||||
Paralog (225) | |||||||||
Structured_description | Automated_description | Enriched in AVA; GABAergic neurons; and intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including skn-1; hsf-1; and npr-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including R24; paraquat; and bortezomib based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y82E9BL.15 | |||||||
Corresponding_CDS_history | Y82E9BL.15:wp268 | ||||||||
Corresponding_transcript | Y82E9BL.15.1 | ||||||||
Other_sequence (26) | |||||||||
Associated_feature (3) | |||||||||
Experimental_info | RNAi_result | WBRNAi00019991 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020012 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058570 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1023856 | ||||||||
Expr1161978 | |||||||||
Expr2011513 | |||||||||
Expr2029750 | |||||||||
Drives_construct | WBCnstr00024275 | ||||||||
Construct_product | WBCnstr00024275 | ||||||||
Microarray_results | SMD_Y119D3_442.B | ||||||||
SMD_Y119D3_457.C | |||||||||
176249_at | |||||||||
A_12_P101251 | |||||||||
Aff_Y119D3_442.B | |||||||||
GPL14144_Y82E9BL.15_379-438_0.928_3_A | |||||||||
GPL19516_CGZ0055177 | |||||||||
GPL21109_Y82E9BL.15 | |||||||||
GPL3518_CE27543 | |||||||||
GPL8304_CE_WBGene00022331_A | |||||||||
GPL8673_Y82E9BL_15P00212 | |||||||||
GPL8673_Y82E9BL_15P00329 | |||||||||
GPL8673_Y82E9BL_15P00420 | |||||||||
GPL9450_Y82E9BL.15 | |||||||||
cea2.i.22565 | |||||||||
Expression_cluster (103) | |||||||||
Map_info | Map | III | Position | -22.2885 | Error | 0.019768 | |||
Positive | Positive_clone | Y82E9BL | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |