WormBase Tree Display for Gene: WBGene00021671
expand all nodes | collapse all nodes | view schema
WBGene00021671 | SMap | S_parent | Sequence | Y48G1BM | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | Sequence_name | Y48G1BM.6 | |||||||
Molecular_name | Y48G1BM.6a | ||||||||
Y48G1BM.6a.1 | |||||||||
CE54310 | |||||||||
Y48G1BM.6d | |||||||||
Other_name | CELE_Y48G1BM.6 | Accession_evidence | NDB | BX284601 | |||||
Public_name | Y48G1BM.6 | ||||||||
DB_info | Database | AceView | gene | 1A708 | |||||
WormQTL | gene | WBGene00021671 | |||||||
WormFlux | gene | WBGene00021671 | |||||||
NDB | locus_tag | CELE_Y48G1BM.6 | |||||||
NCBI | gene | 190039 | |||||||
RefSeq | protein | NR_175829.1 | |||||||
NM_001393046.1 | |||||||||
RNAcentral | URSid | URS000242F08F | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 09 Jan 2009 16:50:33 | WBPerson1849 | Event | Acquires_merge | WBGene00021670 | ||||
3 | 10 Nov 2020 23:53:02 | WBPerson51134 | Event | Split_into | WBGene00306121 | ||||
Acquires_merge | WBGene00021670 | ||||||||
Split_into | WBGene00306121 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (67) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (11) | |||||||||
Paralog (20) | |||||||||
Structured_description | Automated_description | Enriched in neurons and retrovesicular ganglion based on RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on tiling array; microarray; and RNA-seq studies. Is affected by nine chemicals including multi-walled carbon nanotube; Alovudine; and metformin based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (5) | |||||||||
Experimental_info | RNAi_result | WBRNAi00055472 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056947 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00056946 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058283 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019988 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1013491 | ||||||||
Expr1039488 | |||||||||
Expr1160392 | |||||||||
Expr2007682 | |||||||||
Expr2025924 | |||||||||
Microarray_results | 176182_s_at | ||||||||
187373_s_at | |||||||||
A_12_P116747 | |||||||||
A_12_P176576 | |||||||||
GPL13394_WBGene00021671 | |||||||||
GPL13914_Y48G1BM.6 | |||||||||
GPL14144_Y48G1BM.6_1688-1747_0.714_333_A | |||||||||
GPL19516_CGZ0047239 | |||||||||
GPL21109_Y48G1BM.6 | |||||||||
GPL8673_Y48G1BM_6P00702 | |||||||||
GPL8673_Y48G1BM_6P01041 | |||||||||
GPL8673_Y48G1BM_6P01734 | |||||||||
GPL8673_Y54G2A_21P01476 | |||||||||
GPL8673_Y54G2A_21P01523 | |||||||||
cea2.3.27268 | |||||||||
cea2.3.28897 | |||||||||
Expression_cluster (154) | |||||||||
Interaction | WBInteraction000373465 | ||||||||
WBInteraction000373467 | |||||||||
WBInteraction000373469 | |||||||||
Map_info | Positive | Positive_clone | Y48G1BM | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | -19.1182 | |||||||
Remark | [2020-11-10T23:53:02.969Z WBPerson51134] Gene Split creating Y48G1BM.10 WBGene00306121: Seems to be a fusion of CDS Y48G1BM.6 and CDS Y48G1BM.10 | Curator_confirmed | WBPerson51134 | ||||||
[2020-11-10T23:54:39.038Z WBPerson51134] Gene Updated: Biotype changed to CDS | Curator_confirmed | WBPerson51134 | |||||||
Method | Gene |