WormBase Tree Display for Gene: WBGene00021048
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| WBGene00021048 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lro-1 | Person_evidence | WBPerson625 | |||||
| WBPerson18084 | |||||||||
| Sequence_name | W05H9.1 | ||||||||
| Molecular_name | W05H9.1a | ||||||||
| W05H9.1a.1 | |||||||||
| CE05036 | |||||||||
| W05H9.1b | |||||||||
| CE48152 | |||||||||
| W05H9.1b.1 | |||||||||
| Other_name | CELE_W05H9.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | lro-1 | ||||||||
| DB_info | Database | AceView | gene | XG891 | |||||
| WormQTL | gene | WBGene00021048 | |||||||
| WormFlux | gene | WBGene00021048 | |||||||
| NDB | locus_tag | CELE_W05H9.1 | |||||||
| NCBI | gene | 180901 | |||||||
| RefSeq | protein | NM_001277028.4 | |||||||
| NM_076649.6 | |||||||||
| TrEMBL | UniProtAcc | L8E833 | |||||||
| Q23179 | |||||||||
| UniProt_GCRP | UniProtAcc | Q23179 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Jan 2024 23:28:21 | WBPerson51134 | Name_change | CGC_name | lro-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lro | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024224 | ||||||||
| Contained_in_operon | CEOPX164 | ||||||||
| Ortholog (25) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed (2) | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W05H9.1a | |||||||
| W05H9.1b | |||||||||
| Corresponding_transcript | W05H9.1a.1 | ||||||||
| W05H9.1b.1 | |||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf648219 | ||||||||
| WBsf662876 | |||||||||
| WBsf235822 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054851 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00066632 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019640 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036316 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram957 | ||||||||
| Chronogram968 | |||||||||
| Expr1027817 | |||||||||
| Expr1039176 | |||||||||
| Expr1158395 | |||||||||
| Expr2006813 | |||||||||
| Expr2025038 | |||||||||
| Drives_construct | WBCnstr00024709 | ||||||||
| Construct_product | WBCnstr00024709 | ||||||||
| Microarray_results | SMD_W05H9.1 | ||||||||
| 179806_at | |||||||||
| A_12_P100894 | |||||||||
| Aff_W05H9.1 | |||||||||
| GPL13394_WBGene00021048 | |||||||||
| GPL13914_W05H9.1 | |||||||||
| GPL14144_W05H9.1_1048-1107_0.780_77_B | |||||||||
| GPL14144_W05H9.1_1108-1167_0.969_1_A | |||||||||
| GPL14144_W05H9.1_603-662_0.893_31_C | |||||||||
| GPL19516_CGZ0038517 | |||||||||
| GPL19516_CGZ0038518 | |||||||||
| GPL19516_CGZ0038519 | |||||||||
| GPL19516_CGZ0038520 | |||||||||
| GPL21109_W05H9.1a.1 | |||||||||
| GPL3518_CE05036 | |||||||||
| GPL8304_CE_WBGene00021048_A | |||||||||
| GPL8304_CE_WBGene00021048_B | |||||||||
| GPL8304_CE_WBGene00021048_C | |||||||||
| GPL8673_W05H9_1P00037 | |||||||||
| GPL8673_W05H9_1P00191 | |||||||||
| GPL8673_W05H9_1P00605 | |||||||||
| GPL9450_W05H9.1 | |||||||||
| cea2.c.48369 | |||||||||
| Expression_cluster (293) | |||||||||
| Interaction (54) | |||||||||
| Map_info | Map | X | Position | -3.21268 | |||||
| Positive | Positive_clone | W05H9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006047 | ||||||||
| WBPaper00049083 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
