WormBase Tree Display for Gene: WBGene00020842
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WBGene00020842 | SMap | S_parent | Sequence | T27A3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 4 | |||||||
Name | CGC_name | nmrk-1 | Person_evidence | WBPerson1983 | |||||
Sequence_name | T27A3.6 | ||||||||
Molecular_name | T27A3.6 | ||||||||
T27A3.6.1 | |||||||||
CE14227 | |||||||||
Other_name | moc-4 | Paper_evidence | WBPaper00056452 | ||||||
CELE_T27A3.6 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | nmrk-1 | ||||||||
DB_info | Database (13) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 03 Apr 2017 10:56:14 | WBPerson2970 | Name_change | CGC_name | nmrk-1 | ||||
3 | 12 Aug 2019 12:44:14 | WBPerson1983 | Name_change | Other_name | moc-4 | ||||
4 | 11 Sep 2019 12:48:59 | WBPerson1983 | Name_change | CGC_name | nmrk-1 | ||||
Other_name | moc-4 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nmrk | ||||||||
Allele (17) | |||||||||
Strain | WBStrain00032639 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (13) | |||||||||
Contained_in_operon | CEOP1300 | ||||||||
Ortholog (34) | |||||||||
Structured_description (2) | |||||||||
Disease_info | Potential_model | DOID:0111163 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7193) | ||||
Disease_relevance | Mutations in the human gene Molybdenum cofactor synthesis gene 2 (MOCS2; orthologous to elegans T27A3.6), are associated with Molybdenum cofactor deficiency, type B, which is an autosomal recessive disease where there is a loss of all molybdoenzyme activities, characterized by neurological damage, seizures and early childhood death. | Homo sapiens | Accession_evidence | OMIM | 252150 | ||||
603708 | |||||||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 26 Jun 2012 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T27A3.6 | |||||||
Corresponding_transcript | T27A3.6.1 | ||||||||
Other_sequence | CBC15288_1 | ||||||||
CR05650 | |||||||||
CRC00288_1 | |||||||||
Associated_feature | WBsf649219 | ||||||||
WBsf219542 | |||||||||
Experimental_info | RNAi_result | WBRNAi00054263 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054264 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00036016 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004319 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076715 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00103547 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00116636 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1012188 | ||||||||
Expr1039085 | |||||||||
Expr1157811 | |||||||||
Expr2014334 | |||||||||
Expr2032575 | |||||||||
Drives_construct | WBCnstr00024844 | ||||||||
Construct_product | WBCnstr00024844 | ||||||||
Microarray_results | SMD_T27A3.6 | ||||||||
182114_at | |||||||||
A_12_P112489 | |||||||||
A_12_P176999 | |||||||||
A_12_P177000 | |||||||||
Aff_T27A3.6 | |||||||||
GPL13394_WBGene00020842 | |||||||||
GPL13914_T27A3.6 | |||||||||
GPL14144_T27A3.6_24-83_0.877_20_C | |||||||||
GPL14144_T27A3.6_849-908_0.925_4_A | |||||||||
GPL14144_T27A3.6_948-1007_0.864_29_B | |||||||||
GPL19516_CGZ0037047 | |||||||||
GPL21109_T27A3.6 | |||||||||
GPL3518_CE14227 | |||||||||
GPL8304_CE_WBGene00020842_A | |||||||||
GPL8304_CE_WBGene00020842_C | |||||||||
GPL8673_T27A3_6P00308 | |||||||||
GPL8673_T27A3_6P00459 | |||||||||
GPL8673_T27A3_6P00659 | |||||||||
GPL9450_T27A3.6 | |||||||||
cea2.i.04880 | |||||||||
Expression_cluster (89) | |||||||||
Interaction (55) | |||||||||
Map_info | Map | I | Position | 0.784315 | |||||
Positive | Positive_clone | T27A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00051761 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00056452 | |||||||||
WBPaper00064339 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |