WormBase Tree Display for Gene: WBGene00020587
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WBGene00020587 | SMap | S_parent | Sequence | T19H12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ugt-9 | Person_evidence | WBPerson1208 | |||||
WBPerson655 | |||||||||
Sequence_name | T19H12.1 | ||||||||
Molecular_name | T19H12.1a | ||||||||
T19H12.1a.1 | |||||||||
CE13752 | |||||||||
T19H12.1b | |||||||||
CE41265 | |||||||||
T19H12.1b.1 | |||||||||
Other_name | CELE_T19H12.1 | Accession_evidence | NDB | BX284605 | |||||
Public_name | ugt-9 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00020587 | |||||
WormFlux | gene | WBGene00020587 | |||||||
NDB | locus_tag | CELE_T19H12.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020587|UniProtKB=O01617 | |||||||
family | PTHR48043 | ||||||||
NCBI | gene | 178883 | |||||||
RefSeq | protein | NM_001129547.5 | |||||||
NM_071911.7 | |||||||||
TREEFAM | TREEFAM_ID | TF352368 | |||||||
TrEMBL | UniProtAcc | O01617 | |||||||
H2KZ88 | |||||||||
UniProt_GCRP | UniProtAcc | O01617 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 10 Jun 2005 11:17:00 | WBPerson2970 | Name_change | CGC_name | ugt-9 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ugt | ||||||||
Allele (34) | |||||||||
Strain | WBStrain00037851 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (7) | |||||||||
Ortholog (109) | |||||||||
Paralog (74) | |||||||||
Structured_description | Automated_description | Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Expressed in pharyngeal cell. Is an ortholog of several human genes including UGT2B10 (UDP glucuronosyltransferase family 2 member B10); UGT2B4 (UDP glucuronosyltransferase family 2 member B4); and UGT2B7 (UDP glucuronosyltransferase family 2 member B7). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T19H12.1a | |||||||
T19H12.1b | |||||||||
Corresponding_CDS_history | T19H12.1:wp177 | ||||||||
Corresponding_transcript | T19H12.1a.1 | ||||||||
T19H12.1b.1 | |||||||||
Other_sequence | SS03189 | ||||||||
Associated_feature | WBsf028070 | ||||||||
WBsf028071 | |||||||||
WBsf646782 | |||||||||
WBsf231709 | |||||||||
Experimental_info | RNAi_result (4) | ||||||||
Expr_pattern | Expr8250 | ||||||||
Expr1038972 | |||||||||
Expr1157122 | |||||||||
Expr2017817 | |||||||||
Expr2035954 | |||||||||
Drives_construct | WBCnstr00013211 | ||||||||
WBCnstr00025027 | |||||||||
Construct_product | WBCnstr00025027 | ||||||||
Microarray_results | SMD_T19H12.1 | ||||||||
191776_at | |||||||||
A_12_P119287 | |||||||||
Aff_T19H12.1 | |||||||||
GPL13394_WBGene00020587 | |||||||||
GPL13914_T19H12.1 | |||||||||
GPL14144_H23N18.4_802-861_0.905_29_B | |||||||||
GPL14144_H23N18.4_834-893_0.914_20_A | |||||||||
GPL14144_H23N18.4_931-990_0.900_32_C | |||||||||
GPL19516_CGZ0035629 | |||||||||
GPL19516_CGZ0035630 | |||||||||
GPL21109_T19H12.1a | |||||||||
GPL3518_CE13752 | |||||||||
GPL8304_CE_WBGene00020587_A | |||||||||
GPL8304_CE_WBGene00020587_B | |||||||||
GPL8304_CE_WBGene00020587_C | |||||||||
GPL8673_T19H12_1P00487 | |||||||||
GPL8673_T19H12_1P00499 | |||||||||
GPL8673_T19H12_1P01461 | |||||||||
GPL9450_T19H12.1 | |||||||||
cea2.p.125242 | |||||||||
Expression_cluster (242) | |||||||||
Interaction | WBInteraction000125078 | ||||||||
WBInteraction000257431 | |||||||||
WBInteraction000271086 | |||||||||
WBInteraction000287680 | |||||||||
WBInteraction000308774 | |||||||||
WBInteraction000312807 | |||||||||
WBInteraction000375826 | |||||||||
WBInteraction000450455 | |||||||||
WBInteraction000503715 | |||||||||
Map_info | Map | V | Position | -3.74218 | Error | 0.003567 | |||
Positive | Positive_clone | T19H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |