WormBase Tree Display for Gene: WBGene00020339
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| WBGene00020339 | SMap | S_parent | Sequence | T08A9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name (5) | |||||||||
| DB_info | Database | AceView | gene | XH949 | |||||
| WormQTL | gene | WBGene00020339 | |||||||
| WormFlux | gene | WBGene00020339 | |||||||
| NDB | locus_tag | CELE_T08A9.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020339|UniProtKB=H2KYJ2 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 188262 | |||||||
| RefSeq | protein | NM_171722.4 | |||||||
| NM_001129708.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | H2KYJ2 | |||||||
| Q8MPX6 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KYJ2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 03 Aug 2010 10:05:58 | WBPerson2970 | Name_change | CGC_name | ttr-59 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00021686 | ||||||||
| 00084449 | |||||||||
| 00124981 | |||||||||
| Ortholog (21) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface; extracellular region; and membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info (5) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052822 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1016292 | ||||||||
| Expr1038859 | |||||||||
| Expr1156422 | |||||||||
| Expr2017623 | |||||||||
| Expr2035763 | |||||||||
| Drives_construct | WBCnstr00025209 | ||||||||
| Construct_product | WBCnstr00025209 | ||||||||
| Microarray_results | SMD_T08A9.2 | ||||||||
| 180837_at | |||||||||
| A_12_P104023 | |||||||||
| Aff_T08A9.2 | |||||||||
| GPL14144_T08A9.11b_103-162_0.912_3_C | |||||||||
| GPL14144_T08A9.11b_227-286_0.926_1_A | |||||||||
| GPL14144_T08A9.11b_384-443_0.915_2_B | |||||||||
| GPL19516_CGZ0034090 | |||||||||
| GPL19516_CGZ0034091 | |||||||||
| GPL21109_T08A9.11a | |||||||||
| GPL8304_CE_WBGene00020339_A | |||||||||
| GPL8304_CE_WBGene00020339_B | |||||||||
| GPL8673_T08A9_11P00023 | |||||||||
| GPL8673_T08A9_11P00042 | |||||||||
| GPL8673_T08A9_11P00046 | |||||||||
| GPL9450_T08A9.11 | |||||||||
| cea2.c.47624 | |||||||||
| Expression_cluster (203) | |||||||||
| Interaction | WBInteraction000552044 | ||||||||
| WBInteraction000554486 | |||||||||
| WBInteraction000576360 | |||||||||
| WBInteraction000585639 | |||||||||
| Map_info | Map | X | Position | -1.75478 | |||||
| Positive | Positive_clone | T08A9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
