WormBase Tree Display for Gene: WBGene00019998
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WBGene00019998 | SMap | S_parent | Sequence | R10H1 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (29) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (18) | ||||||
Structured_description | Automated_description | Enriched in several structures, including anterior hypodermis; body wall musculature; interfacial epithelial cell; intestine; and rectal gland cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; skn-1; and dpy-10 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by nine chemicals including Rifampin; Psoralens; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Coiled-coil domain-containing protein 50; Coiled-coil domain-containing protein 50, N-terminal; and Coiled-coil domain-containing protein 50 N-terminus. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | R10H1.1 | ||||
Corresponding_CDS_history | R10H1.1:wp85 | |||||
Corresponding_transcript | R10H1.1.1 | |||||
Other_sequence | CSC02172_1 | |||||
FD517248.1 | ||||||
Associated_feature | WBsf657170 | |||||
WBsf657826 | ||||||
WBsf988462 | ||||||
WBsf221599 | ||||||
Experimental_info | RNAi_result | WBRNAi00051734 | Inferred_automatically | RNAi_primary | ||
WBRNAi00017725 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1025223 | |||||
Expr1038684 | ||||||
Expr1155399 | ||||||
Expr2005565 | ||||||
Expr2023783 | ||||||
Drives_construct | WBCnstr00025441 | |||||
Construct_product | WBCnstr00025441 | |||||
Microarray_results | SMD_R10H1.1 | |||||
190234_at | ||||||
A_12_P101775 | ||||||
Aff_R10H1.1 | ||||||
GPL13394_WBGene00019998 | ||||||
GPL13914_R10H1.1 | ||||||
GPL14144_R10H1.1_170-229_0.947_1_A | ||||||
GPL14144_R10H1.1_349-408_0.945_2_B | ||||||
GPL14144_R10H1.1_49-108_0.860_14_C | ||||||
GPL19516_CGZ0031812 | ||||||
GPL21109_R10H1.1 | ||||||
GPL8304_CE_WBGene00019998_A | ||||||
GPL8304_CE_WBGene00019998_B | ||||||
GPL8673_R10H1_1P00079 | ||||||
GPL8673_R10H1_1P00106 | ||||||
GPL8673_R10H1_1P00194 | ||||||
GPL9450_R10H1.1 | ||||||
cea2.c.13730 | ||||||
Expression_cluster (159) | ||||||
Interaction (76) | ||||||
Map_info | Positive | Positive_clone | R10H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | II | 0.5034 | ||||
Method | Gene |