WormBase Tree Display for Gene: WBGene00019143
expand all nodes | collapse all nodes | view schema
WBGene00019143 | SMap | S_parent | Sequence | H01M10 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (40) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (25) | ||||||
Paralog | WBGene00011137 | Caenorhabditis elegans | From_analysis | Panther | ||
WBGene00015947 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00020759 | Caenorhabditis elegans | From_analysis | Panther | |||
Structured_description | Automated_description | Enriched in several structures, including ABplpppaaa; ABplpppapa; coelomocyte; excretory gland cell; and rectal epithelial cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and sir-2.1 based on microarray and RNA-seq studies. Is affected by six chemicals including Tunicamycin; Doxycycline; and paraquat based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed (2) | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | H01M10.1 | ||||
Corresponding_CDS_history | H01M10.1:wp156 | |||||
Corresponding_transcript | H01M10.1.1 | |||||
Other_sequence | JI173241.1 | |||||
Associated_feature | WBsf1004373 | |||||
WBsf1004374 | ||||||
WBsf1004375 | ||||||
WBsf1022484 | ||||||
WBsf237099 | ||||||
Experimental_info | RNAi_result | WBRNAi00062526 | Inferred_automatically | RNAi_primary | ||
WBRNAi00049255 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00033640 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1014143 | |||||
Expr1038265 | ||||||
Expr1152999 | ||||||
Expr2004502 | ||||||
Expr2022728 | ||||||
Drives_construct | WBCnstr00026031 | |||||
Construct_product | WBCnstr00026031 | |||||
Microarray_results | SMD_H01M10.1 | |||||
185767_at | ||||||
A_12_P106289 | ||||||
Aff_H01M10.1 | ||||||
GPL13394_WBGene00019143 | ||||||
GPL13914_H01M10.1 | ||||||
GPL14144_H01M10.1_402-461_0.935_5_B | ||||||
GPL14144_H01M10.1_467-526_0.934_6_C | ||||||
GPL14144_H01M10.1_654-713_0.947_1_A | ||||||
GPL19516_CGZ0025741 | ||||||
GPL21109_H01M10.1 | ||||||
GPL3518_CE19912 | ||||||
GPL8304_CE_WBGene00019143_A | ||||||
GPL8304_CE_WBGene00019143_C | ||||||
GPL8673_H01M10_1P00036 | ||||||
GPL8673_H01M10_1P00217 | ||||||
GPL8673_H01M10_1P00412 | ||||||
GPL9450_H01M10.1 | ||||||
cea2.i.55104 | ||||||
Expression_cluster (128) | ||||||
Map_info | Positive | Positive_clone | H01M10 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | X | -14.3367 | ||||
Method | Gene |