WormBase Tree Display for Gene: WBGene00018998
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| WBGene00018998 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | flap-1 | Person_evidence | WBPerson4079 | |||||
| WBPerson55 | |||||||||
| Sequence_name | F57B9.7 | ||||||||
| Molecular_name | F57B9.7a | ||||||||
| F57B9.7a.1 | |||||||||
| CE31011 | |||||||||
| F57B9.7b | |||||||||
| CE31012 | |||||||||
| F57B9.7b.1 | |||||||||
| Other_name | CELE_F57B9.7 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | flap-1 | ||||||||
| DB_info | Database | AceView | gene | 3I14 | |||||
| WormQTL | gene | WBGene00018998 | |||||||
| WormFlux | gene | WBGene00018998 | |||||||
| NDB | locus_tag | CELE_F57B9.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018998|UniProtKB=Q8MQ17 | |||||||
| family | PTHR19212 | ||||||||
| NCBI | gene | 175964 | |||||||
| RefSeq | protein | NM_171879.7 | |||||||
| NM_171178.7 | |||||||||
| TREEFAM | TREEFAM_ID | TF314109 | |||||||
| TrEMBL | UniProtAcc | H2KZX2 | |||||||
| Q8MQ17 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8MQ17 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 27 Jul 2007 16:28:52 | WBPerson2970 | Name_change | CGC_name | flap-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | flap | ||||||||
| Allele (62) | |||||||||
| Strain | WBStrain00033132 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00123954 | ||||||||
| Ortholog (40) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of human LRRFIP2 (LRR binding FLII interacting protein 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F57B9.7a | |||||||
| F57B9.7b | |||||||||
| Corresponding_transcript | F57B9.7a.1 | ||||||||
| F57B9.7b.1 | |||||||||
| Other_sequence (32) | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035311 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048840 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005490 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005829 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008107 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005963 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002278 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018375 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00073147 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (5) | |||||||||
| Drives_construct | WBCnstr00026137 | ||||||||
| Construct_product | WBCnstr00026137 | ||||||||
| Microarray_results | SMD_F57B9.7 | ||||||||
| SMD_T07E3.7 | |||||||||
| 173596_at | |||||||||
| 173597_s_at | |||||||||
| 181595_at | |||||||||
| A_12_P102364 | |||||||||
| Aff_F57B9.7 | |||||||||
| Aff_T07E3.7 | |||||||||
| GPL13394_WBGene00018998 | |||||||||
| GPL13914_F57B9.7 | |||||||||
| GPL14144_F57B9.7b_424-483_0.917_4_B | |||||||||
| GPL14144_F57B9.7b_676-735_0.910_6_C | |||||||||
| GPL14144_F57B9.7b_755-814_0.936_1_A | |||||||||
| GPL19516_CGZ0024935 | |||||||||
| GPL19516_CGZ0024936 | |||||||||
| GPL21109_F57B9.7a | |||||||||
| GPL3518_CE31011 | |||||||||
| GPL8304_CE_WBGene00018998_A | |||||||||
| GPL8304_CE_WBGene00018998_C | |||||||||
| GPL8673_F57B9_7aP00001 | |||||||||
| GPL8673_F57B9_7aP00440 | |||||||||
| GPL8673_F57B9_7aP00587 | |||||||||
| GPL8673_F57B9_7bP00201 | |||||||||
| GPL8673_F57B9_7bP00214 | |||||||||
| GPL8673_F57B9_7bP00221 | |||||||||
| GPL9450_F57B9.7b | |||||||||
| cea2.d.29834 | |||||||||
| Expression_cluster (114) | |||||||||
| Interaction | WBInteraction000030663 | ||||||||
| WBInteraction000030726 | |||||||||
| WBInteraction000113431 | |||||||||
| WBInteraction000381554 | |||||||||
| WBInteraction000384720 | |||||||||
| WBInteraction000510748 | |||||||||
| WBInteraction000510794 | |||||||||
| WBInteraction000539572 | |||||||||
| WBInteraction000559327 | |||||||||
| WBInteraction000563885 | |||||||||
| Map_info | Map | III | Position | -0.897859 | Error | 0.001676 | |||
| Positive | Positive_clone | F57B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
