WormBase Tree Display for Gene: WBGene00018194
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WBGene00018194 | SMap | S_parent | Sequence | F39E9 | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | ||||||||
Name (4) | ||||||||||
DB_info | Database | AceView | gene | 2D607 | ||||||
WormQTL | gene | WBGene00018194 | ||||||||
WormFlux | gene | WBGene00018194 | ||||||||
NDB | locus_tag | CELE_F39E9.1 | ||||||||
NCBI | gene | 185493 | ||||||||
Species | Caenorhabditis elegans | |||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
2 | 22 Apr 2010 09:19:18 | WBPerson1867 | Event | Split_into | WBGene00195075 | |||||
3 | 19 Feb 2013 15:51:50 | WBPerson615 | Event | Acquires_merge | WBGene00195075 | |||||
Changed_class | CDS | Pseudogene | ||||||||
Acquires_merge | WBGene00195075 | |||||||||
Status | Live | |||||||||
Gene_info | Biotype | SO:0000336 | ||||||||
Allele (111) | ||||||||||
RNASeq_FPKM (74) | ||||||||||
Ortholog | WBGene00064591 | Caenorhabditis remanei | From_analysis | OMA | ||||||
WBGene00064592 | Caenorhabditis remanei | From_analysis | OMA | |||||||
WBGene00154350 | Caenorhabditis brenneri | From_analysis | OMA | |||||||
WBGene00034314 | Caenorhabditis briggsae | From_analysis | OMA | |||||||
WBGene00031831 | Caenorhabditis briggsae | From_analysis | OMA | |||||||
Structured_description | Automated_description | Enriched in head mesodermal cell; intestine; rect_D; rect_VL; and rect_VR based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray and RNA-seq studies. Is affected by sixteen chemicals including Heme; D-glucopyranose; and multi-walled carbon nanotube based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | |||||||||
WBPerson37462 | ||||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
Molecular_info | Corresponding_CDS_history | F39E9.1:wp143 | ||||||||
F39E9.1:wp214 | ||||||||||
F39E9.1a:wp239 | ||||||||||
Corresponding_pseudogene | F39E9.1 | |||||||||
Associated_feature | WBsf657416 | |||||||||
WBsf657417 | ||||||||||
WBsf220999 | ||||||||||
Experimental_info | Expr_pattern | Expr1014431 | ||||||||
Expr1037833 | ||||||||||
Expr1150647 | ||||||||||
Expr1150652 | ||||||||||
Microarray_results | SMD_F39E9.1 | |||||||||
179933_at | ||||||||||
185145_at | ||||||||||
A_12_P114994 | ||||||||||
A_12_P119757 | ||||||||||
A_12_P154436 | ||||||||||
A_12_P173417 | ||||||||||
Aff_F39E9.1 | ||||||||||
GPL14144_F39E9.1_1114-1173_0.963_1_A | ||||||||||
GPL19516_CGZ0011383 | ||||||||||
GPL19516_CGZ0020660 | ||||||||||
GPL19516_CGZ0046771 | ||||||||||
GPL21109_Cat_F39E9.1 | ||||||||||
GPL21109_F39E9.1 | ||||||||||
GPL21109_Y46D2A.2 | ||||||||||
GPL3518_CE10098 | ||||||||||
GPL8304_CE_WBGene00018194_A | ||||||||||
GPL8673_F39E9_1P00530 | ||||||||||
GPL8673_F39E9_1P01076 | ||||||||||
GPL8673_Y46D2A_2P00206 | ||||||||||
GPL8673_Y46D2A_2P00761 | ||||||||||
Expression_cluster (181) | ||||||||||
Interaction | WBInteraction000362451 | |||||||||
Map_info | Positive | Positive_clone | F39E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Interpolated_map_position | II | -6.71815 | ||||||||
Method | Gene |