WormBase Tree Display for Gene: WBGene00018085
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| WBGene00018085 | SMap | S_parent | Sequence | F36A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-20 | |||||||
| Sequence_name | F36A4.8 | ||||||||
| Molecular_name | F36A4.8 | ||||||||
| F36A4.8.1 | |||||||||
| CE07184 | |||||||||
| F36A4.8.2 | |||||||||
| Other_name | CELE_F36A4.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ttr-20 | ||||||||
| DB_info | Database | AceView | gene | 4F11 | |||||
| WormQTL | gene | WBGene00018085 | |||||||
| WormFlux | gene | WBGene00018085 | |||||||
| NDB | locus_tag | CELE_F36A4.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018085|UniProtKB=Q20089 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 177189 | |||||||
| RefSeq | protein | NM_068121.8 | |||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | Q20089 | |||||||
| UniProt_GCRP | UniProtAcc | Q20089 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-20 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00067139 | ||||||||
| 00123325 | |||||||||
| Ortholog (26) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F36A4.8 | |||||||
| Corresponding_transcript | F36A4.8.1 | ||||||||
| F36A4.8.2 | |||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf660085 | ||||||||
| WBsf660086 | |||||||||
| WBsf228169 | |||||||||
| Experimental_info | RNAi_result (2) | ||||||||
| Expr_pattern | Expr1026403 | ||||||||
| Expr1037791 | |||||||||
| Expr1150329 | |||||||||
| Expr2017585 | |||||||||
| Expr2035724 | |||||||||
| Drives_construct | WBCnstr00026786 | ||||||||
| Construct_product | WBCnstr00026786 | ||||||||
| Microarray_results | SMD_F36A4.8 | ||||||||
| 183694_at | |||||||||
| A_12_P118914 | |||||||||
| Aff_F36A4.8 | |||||||||
| GPL13394_WBGene00018085 | |||||||||
| GPL13914_F36A4.8 | |||||||||
| GPL14144_F36A4.8_179-238_0.906_12_C | |||||||||
| GPL14144_F36A4.8_243-302_0.938_6_B | |||||||||
| GPL14144_F36A4.8_340-399_0.962_1_A | |||||||||
| GPL19516_CGZ0019926 | |||||||||
| GPL21109_F36A4.8 | |||||||||
| GPL3518_CE07184 | |||||||||
| GPL8304_CE_WBGene00018085_A | |||||||||
| GPL8304_CE_WBGene00018085_B | |||||||||
| GPL8304_CE_WBGene00018085_C | |||||||||
| GPL8673_F36A4_8P00019 | |||||||||
| GPL8673_F36A4_8P00063 | |||||||||
| GPL8673_F36A4_8P00337 | |||||||||
| GPL9450_F36A4.8 | |||||||||
| cea2.p.91965 | |||||||||
| Expression_cluster (147) | |||||||||
| Interaction | WBInteraction000345173 | ||||||||
| WBInteraction000385617 | |||||||||
| WBInteraction000385687 | |||||||||
| Map_info | Map | IV | Position | 0.005997 | |||||
| Positive | Positive_clone | F36A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
