WormBase Tree Display for Gene: WBGene00018085
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WBGene00018085 | SMap | S_parent | Sequence | F36A4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ttr-20 | |||||||
Sequence_name | F36A4.8 | ||||||||
Molecular_name | F36A4.8 | ||||||||
F36A4.8.1 | |||||||||
CE07184 | |||||||||
F36A4.8.2 | |||||||||
Other_name | CELE_F36A4.8 | Accession_evidence | NDB | BX284604 | |||||
Public_name | ttr-20 | ||||||||
DB_info | Database | AceView | gene | 4F11 | |||||
WormQTL | gene | WBGene00018085 | |||||||
WormFlux | gene | WBGene00018085 | |||||||
NDB | locus_tag | CELE_F36A4.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018085|UniProtKB=Q20089 | |||||||
family | PTHR21700 | ||||||||
NCBI | gene | 177189 | |||||||
RefSeq | protein | NM_068121.8 | |||||||
TREEFAM | TREEFAM_ID | TF315773 | |||||||
TrEMBL | UniProtAcc | Q20089 | |||||||
UniProt_GCRP | UniProtAcc | Q20089 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-20 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ttr | ||||||||
Allele (24) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00067139 | ||||||||
00123325 | |||||||||
Ortholog (26) | |||||||||
Paralog (62) | |||||||||
Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00031837 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046460 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1026403 | ||||||||
Expr1037791 | |||||||||
Expr1150329 | |||||||||
Expr2017585 | |||||||||
Expr2035724 | |||||||||
Drives_construct | WBCnstr00026786 | ||||||||
Construct_product | WBCnstr00026786 | ||||||||
Microarray_results | SMD_F36A4.8 | ||||||||
183694_at | |||||||||
A_12_P118914 | |||||||||
Aff_F36A4.8 | |||||||||
GPL13394_WBGene00018085 | |||||||||
GPL13914_F36A4.8 | |||||||||
GPL14144_F36A4.8_179-238_0.906_12_C | |||||||||
GPL14144_F36A4.8_243-302_0.938_6_B | |||||||||
GPL14144_F36A4.8_340-399_0.962_1_A | |||||||||
GPL19516_CGZ0019926 | |||||||||
GPL21109_F36A4.8 | |||||||||
GPL3518_CE07184 | |||||||||
GPL8304_CE_WBGene00018085_A | |||||||||
GPL8304_CE_WBGene00018085_B | |||||||||
GPL8304_CE_WBGene00018085_C | |||||||||
GPL8673_F36A4_8P00019 | |||||||||
GPL8673_F36A4_8P00063 | |||||||||
GPL8673_F36A4_8P00337 | |||||||||
GPL9450_F36A4.8 | |||||||||
cea2.p.91965 | |||||||||
Expression_cluster (147) | |||||||||
Interaction | WBInteraction000345173 | ||||||||
WBInteraction000385617 | |||||||||
WBInteraction000385687 | |||||||||
Map_info | Map | IV | Position | 0.005997 | |||||
Positive | Positive_clone | F36A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |