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WormBase Tree Display for Gene: WBGene00017900

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Name Class

WBGene00017900SMapS_parentSequenceF28E10
IdentityVersion1
NameSequence_nameF28E10.1
Molecular_name (30)
Other_nameCELE_F28E10.1Accession_evidenceNDBBX284604
Public_nameF28E10.1
DB_infoDatabaseAceViewgene4F353
WormQTLgeneWBGene00017900
WormFluxgeneWBGene00017900
NDBlocus_tagCELE_F28E10.1
NCBIgene177223
RefSeqproteinNM_001380201.1
NM_001307314.3
NM_001307315.4
NM_001027982.5
NM_001380199.1
NM_001027983.4
NM_001380200.1
NM_001268335.4
NM_001027981.6
NM_001027984.5
TREEFAMTREEFAM_IDTF344064
TrEMBLUniProtAccH2KZT7
H2KZT6
H2KZT8
D7SFK5
U4PQQ4
U4PDU4
U4PAK4
U4PLE4
U4PAZ0
D7SFK7
UniProt_GCRPUniProtAccU4PAK4
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (308)
RNASeq_FPKM (74)
Ortholog (25)
Structured_descriptionAutomated_descriptionEnriched in XXX cell; head mesodermal cell; neurons; retrovesicular ganglion; and ventral nerve cord based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on tiling array; microarray; and RNA-seq studies. Is affected by nine chemicals including stavudine; Zidovudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF28E10.1a
F28E10.1b
F28E10.1c
F28E10.1d
F28E10.1e
F28E10.1f
F28E10.1g
F28E10.1h
F28E10.1i
F28E10.1j
Corresponding_CDS_historyF28E10.1a:wp134
Corresponding_transcriptF28E10.1a.1
F28E10.1b.1
F28E10.1c.1
F28E10.1d.1
F28E10.1e.1
F28E10.1f.1
F28E10.1g.1
F28E10.1h.1
F28E10.1i.1
F28E10.1j.1
Other_sequence (11)
Associated_feature (34)
Experimental_infoRNAi_resultWBRNAi00000529Inferred_automaticallyRNAi_primary
WBRNAi00014052Inferred_automaticallyRNAi_primary
WBRNAi00045838Inferred_automaticallyRNAi_primary
WBRNAi00031532Inferred_automaticallyRNAi_primary
Expr_pattern (5)
Microarray_resultsSMD_F28E10.1
184725_at
A_12_P101062
A_12_P118536
A_12_P149265
A_12_P175367
A_12_P175368
A_12_P175369
A_12_P175370
A_12_P175371
Aff_F28E10.1
GPL13394_WBGene00017900
GPL13914_F28E10.1
GPL14144_F28E10.1a_2293-2352_0.878_24_C
GPL14144_F28E10.1a_2428-2487_0.892_18_B
GPL14144_F28E10.1a_2549-2608_0.904_7_A
GPL19516_CGZ0018721
GPL19516_CGZ0018722
GPL19516_CGZ0018723
GPL19516_CGZ0018724
GPL19516_CGZ0018725
GPL19516_CGZ0018726
GPL19516_CGZ0018727
GPL19516_CGZ0018728
GPL19516_CGZ0018729
GPL19516_CGZ0018730
GPL21109_F28E10.1a
GPL3518_CE28224
GPL8304_CE_WBGene00017900_A
GPL8304_CE_WBGene00017900_B
GPL8673_F28E10_1aP02114
GPL8673_F28E10_1aP02836
GPL8673_F28E10_1aP02914
GPL8673_F28E10_1bP01077
GPL8673_F28E10_1bP01688
GPL8673_F28E10_1bP01998
GPL8673_F28E10_1cP01365
GPL8673_F28E10_1cP01976
GPL8673_F28E10_1cP02286
GPL8673_F28E10_1dP00062
GPL8673_F28E10_1dP00784
GPL8673_F28E10_1dP00862
GPL9450_F28E10.1
cea2.p.91413
Expression_cluster (201)
InteractionWBInteraction000030957
WBInteraction000364704
Map_infoPositivePositive_cloneF28E10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV0.470151
ReferenceWBPaper00012571
WBPaper00026601
WBPaper00031852
MethodGene