WormBase Tree Display for Gene: WBGene00017650
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WBGene00017650 | SMap | S_parent | Sequence | F21A9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F21A9.1 | |||||||
Molecular_name | F21A9.1a | ||||||||
F21A9.1a.1 | |||||||||
CE40304 | |||||||||
F21A9.1b | |||||||||
CE52870 | |||||||||
F21A9.1a.2 | |||||||||
F21A9.1b.1 | |||||||||
Other_name | CELE_F21A9.1 | Accession_evidence | NDB | BX284601 | |||||
Public_name | F21A9.1 | ||||||||
DB_info | Database | AceView | gene | 1E279 | |||||
WormQTL | gene | WBGene00017650 | |||||||
WormFlux | gene | WBGene00017650 | |||||||
NDB | locus_tag | CELE_F21A9.1 | |||||||
NCBI | gene | 184755 | |||||||
RefSeq | protein | NM_001368612.3 | |||||||
NM_001393244.1 | |||||||||
TrEMBL | UniProtAcc | O01528 | |||||||
A0A3P6NNM4 | |||||||||
UniProt_GCRP | UniProtAcc | A0A3P6NNM4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (57) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (20) | |||||||||
Paralog | WBGene00015764 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WormBase-Compara | |||||||||
WBGene00044203 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enriched in FLP; anterior hypodermis; interfacial epithelial cell; and intestine based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-12; and rrf-3 based on microarray and RNA-seq studies. Is affected by ten chemicals including 1-methylnicotinamide; multi-walled carbon nanotube; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F21A9.1a | |||||||
F21A9.1b | |||||||||
Corresponding_CDS_history | F21A9.1:wp102 | ||||||||
F21A9.1:wp160 | |||||||||
Corresponding_transcript | F21A9.1a.1 | ||||||||
F21A9.1a.2 | |||||||||
F21A9.1b.1 | |||||||||
Associated_feature | WBsf656126 | ||||||||
WBsf983206 | |||||||||
WBsf983207 | |||||||||
WBsf1009541 | |||||||||
WBsf1009542 | |||||||||
WBsf217421 | |||||||||
WBsf217422 | |||||||||
Experimental_info | RNAi_result | WBRNAi00031201 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00045167 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016063 | ||||||||
Expr1149105 | |||||||||
Expr2002806 | |||||||||
Expr2021023 | |||||||||
Drives_construct | WBCnstr00027131 | ||||||||
Construct_product | WBCnstr00027131 | ||||||||
Microarray_results | SMD_F21A9.1 | ||||||||
182244_at | |||||||||
A_12_P116731 | |||||||||
Aff_F21A9.1 | |||||||||
GPL13394_WBGene00017650 | |||||||||
GPL13914_F21A9.1 | |||||||||
GPL14144_F21A9.1_136-195_0.925_19_B | |||||||||
GPL14144_F21A9.1_197-256_0.935_10_A | |||||||||
GPL14144_F21A9.1_492-551_0.943_2_C | |||||||||
GPL19516_CGZ0017263 | |||||||||
GPL21109_F21A9.1 | |||||||||
GPL3518_CE09521 | |||||||||
GPL8304_CE_WBGene00017650_A | |||||||||
GPL8304_CE_WBGene00017650_B | |||||||||
GPL8673_F21A9_1P00207 | |||||||||
GPL8673_F21A9_1P00348 | |||||||||
GPL8673_F21A9_1P00458 | |||||||||
GPL9450_F21A9.1 | |||||||||
cea2.i.01777 | |||||||||
Expression_cluster (62) | |||||||||
Interaction | WBInteraction000249199 | ||||||||
WBInteraction000356708 | |||||||||
Map_info | Positive | Positive_clone | F21A9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | -2.84612 | |||||||
Method | Gene |