WormBase Tree Display for Gene: WBGene00017398
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WBGene00017398 | SMap | S_parent | Sequence | F12B6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | slc-17.6 | Person_evidence | WBPerson260 | |||||
Sequence_name | F12B6.2 | ||||||||
Molecular_name (11) | |||||||||
Other_name | CELE_F12B6.2 | Accession_evidence | NDB | BX284601 | |||||
Public_name | slc-17.6 | ||||||||
DB_info | Database | AceView | gene | 1C821 | |||||
WormQTL | gene | WBGene00017398 | |||||||
WormFlux | gene | WBGene00017398 | |||||||
NDB | locus_tag | CELE_F12B6.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017398|UniProtKB=H2KZQ1 | |||||||
family | PTHR11662 | ||||||||
NCBI | gene | 171781 | |||||||
RefSeq | protein | NM_171833.6 | |||||||
NM_058546.6 | |||||||||
NM_001306429.3 | |||||||||
NR_131354.1 | |||||||||
NR_131353.1 | |||||||||
TrEMBL | UniProtAcc | H2KZQ3 | |||||||
X5M917 | |||||||||
H2KZQ1 | |||||||||
UniProt_GCRP | UniProtAcc | H2KZQ1 | |||||||
RNAcentral | URSid | URS0000730A4E | |||||||
URS000073A07E | |||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 27 Jun 2014 15:53:55 | WBPerson2970 | Name_change | CGC_name | slc-17.6 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | slc | ||||||||
Allele (115) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00022470 | ||||||||
00022471 | |||||||||
00022472 | |||||||||
00022473 | |||||||||
00105567 | |||||||||
00122811 | |||||||||
00122812 | |||||||||
Ortholog (32) | |||||||||
Paralog (58) | |||||||||
Structured_description | Automated_description | Predicted to enable transmembrane transporter activity. Predicted to be involved in monoatomic anion transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS (3) | ||||||||
Corresponding_CDS_history | F12B6.2b:wp242 | ||||||||
F12B6.2d:wp242 | |||||||||
Corresponding_transcript | F12B6.2d | ||||||||
F12B6.2e | |||||||||
F12B6.2a.1 | |||||||||
F12B6.2c.1 | |||||||||
F12B6.2f.1 | |||||||||
Associated_feature | WBsf656039 | ||||||||
WBsf982834 | |||||||||
WBsf1009312 | |||||||||
Experimental_info | RNAi_result | WBRNAi00003367 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004604 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00044431 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1024173 | ||||||||
Expr1148377 | |||||||||
Expr2015862 | |||||||||
Expr2034095 | |||||||||
Drives_construct | WBCnstr00027326 | ||||||||
Construct_product | WBCnstr00027326 | ||||||||
Microarray_results | SMD_F12B6.2 | ||||||||
SMD_Y39G10B_248.C | |||||||||
193011_at | |||||||||
A_12_P111948 | |||||||||
A_12_P117103 | |||||||||
A_12_P150565 | |||||||||
A_12_P150566 | |||||||||
Aff_F12B6.2 | |||||||||
Aff_Y39G10B_248.C | |||||||||
GPL13394_WBGene00017398 | |||||||||
GPL13914_F12B6.2 | |||||||||
GPL14144_F12B6.2a_1216-1275_0.880_18_C | |||||||||
GPL14144_F12B6.2a_649-708_0.894_11_B | |||||||||
GPL14144_F12B6.2a_835-894_0.900_10_A | |||||||||
GPL19516_CGZ0015706 | |||||||||
GPL19516_CGZ0015707 | |||||||||
GPL19516_CGZ0015708 | |||||||||
GPL19516_CGZ0015709 | |||||||||
GPL21109_F12B6.2a | |||||||||
GPL21109_F12B6.2b | |||||||||
GPL21109_F12B6.2d | |||||||||
GPL3518_CE30273 | |||||||||
GPL3518_CE30513 | |||||||||
GPL8304_CE_WBGene00017398_A | |||||||||
GPL8304_CE_WBGene00017398_B | |||||||||
GPL8673_F12B6_2aP00768 | |||||||||
GPL8673_F12B6_2aP01056 | |||||||||
GPL8673_F12B6_2aP01411 | |||||||||
GPL8673_F12B6_2bP00642 | |||||||||
GPL8673_F12B6_2bP00930 | |||||||||
GPL8673_F12B6_2bP01285 | |||||||||
GPL8673_F12B6_2cP00056 | |||||||||
GPL8673_F12B6_2cP00642 | |||||||||
GPL8673_F12B6_2cP01285 | |||||||||
GPL8673_F12B6_2dP00056 | |||||||||
GPL8673_F12B6_2dP00768 | |||||||||
GPL8673_F12B6_2dP01056 | |||||||||
GPL9450_F12B6.2b | |||||||||
cea2.d.20140 | |||||||||
Expression_cluster (157) | |||||||||
Interaction (9) | |||||||||
Map_info | Map | I | Position | -10.5915 | |||||
Positive | Positive_clone | F12B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |